Momordica charantia (bitter melon): 111018231
Help
Entry
111018231 CDS
T05045
Name
(RefSeq) protein CHROMATIN REMODELING 20-like
KO
K10779
transcriptional regulator ATRX
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcha03000
]
111018231
03036 Chromosome and associated proteins [BR:
mcha03036
]
111018231
Transcription factors [BR:
mcha03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
111018231
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111018231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
Lsr2
N36
Motif
Other DBs
NCBI-GeneID:
111018231
NCBI-ProteinID:
XP_022149939
UniProt:
A0A6J1D8I3
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MGLKFLGVDEVEEIDDVDGNSCDPFVAAAIANEEELDLSEEQKKKFRKVKEEDDAIFDRK
LQIHLKQKRYQKRYKQEVLQKDVSPVEKVIQRDEEQLVSLVDCLNPVSDEKTDGRQKGVS
DDENGDGCHNLKIDIPNGSDASSDNDMARSMENTASVLPSALSDFVEPLGSKRLIDTREL
NVQTKRSRTISVHNDESSLVKEHSTSNLTKLDNVCNMKQNDHGADSLPPESLNKKIRCTA
CDQVVIKAYAHPFLKVIVCADCKCLMDDKKNVKEPDCSECYCGWCGRNADLVSCKSCKTL
FCISCIRRNLGVECLIKAQSSGWHCCCCCPSLLERLTMQLEEALGSGDLTGSSSDSDSDN
PNADINVTISSKRKRKKKIRRILDDAELGEDTKKKIAIEKERQERLKSLQVQFSSNSKIM
SSAGFCGNLSEGASVEVLGDVSTGYIVNVVREKGEEAVRMPSSISSKLKTHQVSGIRFMW
ENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVL
HNWRQEFLKWKPSELKPLRVFMLEDVTRERRAELLAKWRAKGGVFLIGYSAFRNLSLGKH
VKDRHMAKEIYHALQDGPDILVCDEAHMIKNTKADITQALKQVKCQRRIALTGSPLQNNL
MEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTLDDVKIMNQRSHILYEQLKGFV
QRMDMTVVKKDLPPKTVFVISVKLSPLQRKLYKRFLDVHGFNNGKDSSEQLRKRSFFAGY
QALAQIWNHPGILQLSKEDKYYVKREDAVENFLADDSSSDENMDSNIGIGEKPANANGNH
QDKFVSGFFIKDWWNGLLHANSYKELDYSGKMVLLLEILTMCSELGDKALVFSQSIPTLD
LIEFYLSRLPRRGKGGKFWKKGKDWYRLDGRTEGSERQKIVERFNEPLNKRVKCTLISTR
AGSLGINLHSANRVVIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKR
QVTKEGLAARVVDRQQVYRTISREEMLHLFEFGDDENPEASTELDQGNGHAPHPTTTGHH
GNVLKQKGPLSHGSCSSDKLMESLLGQHHPRWVANYHEHETLLQENEDEKLSKEEQDMAW
EVYRKSLGWEEVQKVSPGDLTSEQKLTTSNVAHPAPETINLAQSRARNRFITRKCTNLSH
LLTLRSQGTKVGCSTVCGECAQEISWEELNRDSKLGK
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgggactcaaatttctgggagttgatgaggtagaggagatagatgacgtcgatggaaat
tcttgtgatccatttgttgcagctgccattgcaaatgaagaagaattggatctttccgaa
gaacaaaagaaaaaattcagaaaggtcaaagaagaagatgatgccatttttgatagaaaa
ctccaaattcatttgaaacaaaaacgatatcagaagagatataaacaggaggtcttgcaa
aaagatgtttcccctgttgaaaaagtgatacaaagagatgaagagcagcttgtttctctt
gttgactgtttgaaccctgtttcagatgagaaaactgatggacgtcaaaagggggtctct
gatgatgaaaatggagatggttgccataatctgaagatcgacatacccaatggttctgat
gcttcaagtgataatgacatggcaaggtctatggagaataccgcttctgtgcttccttca
gctttatctgattttgtggagcctttaggttcaaagcgtttaattgatacgagagaattg
aatgttcaaactaaaaggagtcgaaccatcagtgtacataacgatgaaagttccctggta
aaggagcattctacttccaatctgacgaagttggacaacgtatgcaacatgaaacaaaat
gaccatggtgctgattctcttccaccagagagtctgaacaagaagatccgctgtactgct
tgtgatcaagtggttattaaagcatatgcacatccctttctaaaagtaattgtttgtgca
gattgcaaatgtttgatggatgacaagaagaatgtaaaggaacctgattgctctgaatgc
tattgtggatggtgtggacgaaatgctgatttagttagttgtaaatcatgcaaaactcta
ttttgcatcagttgcattaggaggaaccttggtgtcgagtgcttgatcaaggcccagtct
tctggctggcactgctgttgttgttgcccaagtctcttggaacgcttgactatgcagttg
gaggaggccttaggatctggagatttgacaggttccagctccgatagcgattcagacaac
ccaaatgcagatataaatgtaaccataagctcaaagagaaagcgtaagaaaaagatacgg
aggatacttgatgatgctgaactaggagaagacactaaaaagaaaattgccatagaaaag
gaacgccaagaacgtctgaaatctttacaagttcagttttcctcaaattctaaaattatg
agctctgctggcttttgtggaaacctatctgaaggtgctagtgttgaagtccttggtgat
gtttccactggatatatagtgaacgttgtgagggaaaagggagaagaggcagttagaatg
ccatcgagcatttcgtcgaagttgaaaacccatcaggtttctggaataagatttatgtgg
gaaaatatcattcaatcaataaggaaagtgaagtctggtgataaaggccttggatgtatt
cttgctcatacaatgggccttggtaaaactttccaggttatagcattcttatacactgca
atgagaagtgtggacttgggtctacgaactgctcttatagtcacccctgttaatgtgttg
cataattggcggcaagaatttttaaagtggaagccttcagaattaaagcctcttcgtgtt
ttcatgctagaagatgtaacaagggagagaagggcagagttgcttgcaaagtggagagct
aagggtggtgtctttttaattggttatagtgctttccggaatctatcacttggtaaacat
gtcaaggaccgacacatggctaaagaaatttatcatgcattgcaggatggaccagatata
cttgtttgtgatgaggcccacatgattaaaaataccaaggctgatataacccaggctttg
aaacaagtgaaatgccagagaaggattgcgttaactggatcaccactacaaaacaatctc
atggagtattattgcatggtcgattttgtgagagaaggtttcctgggaagtagccatgag
tttaggaaccgctttcagaaccctatagagaatgggcagcatactaattctactctggat
gatgttaaaataatgaaccagaggtctcatatcctatatgaacagttaaaagggtttgtt
caaagaatggacatgactgtggtaaagaaggacttgccacctaaaactgtctttgtgata
tccgttaagctttctcccttacagaggaagttatacaaaagatttcttgatgtgcatgga
tttaataatggcaaggattccagtgaacagttgaggaagagaagcttttttgctggatac
caagcattagcccagatttggaaccatcctggaatcctgcaattgtcaaaagaagacaaa
tattatgtgaagcgtgaagatgctgttgaaaattttcttgcagatgacagctctagtgat
gaaaacatggattctaatattggcattggagagaagccagcgaatgccaatggaaatcat
caggataagtttgttagtggcttcttcattaaggattggtggaatggcctgcttcatgca
aatagttacaaggagctcgattacagtggcaagatggttttgctactggagatcttaacc
atgtgctctgaattgggtgataaggcattggtattcagccagagcattcctacgcttgac
ctaattgaattctacctttcaagattgcccagacgaggaaagggaggaaaattttggaag
aagggtaaagattggtataggcttgatggaagaactgagggttccgaaagacagaagatt
gttgaaaggtttaatgagcctttaaataagagggtaaaatgtaccctgatatctactaga
gctggatcattgggcatcaatcttcattctgctaatcgcgtcgtcatagtggatggttct
tggaatccaacttatgatcttcaggctatttatcgtgcttggagatatggccaaacaaaa
cctgtgtttgcttacagatttttggcacatggaacaatggaagaaaaaatttacaagcgt
caggtaacaaaggagggactggcggcaagagttgtcgatcgccaacaggtataccggact
atttctcgggaggaaatgttgcatctttttgaatttggtgatgatgagaaccctgaggct
tccaccgagttggaccaaggaaatggccatgcacctcacccgactacaactgggcatcat
ggaaatgtgctcaagcagaaagggcctctttcccatggaagttgctcatctgacaagtta
atggaaagtttacttggccaacaccatccgaggtgggttgctaactaccacgagcacgaa
acattactgcaagagaatgaagatgaaaagctatcaaaggaggagcaagacatggcatgg
gaagtgtacagaaaatcattgggatgggaggaagtgcagaaagtttcgccaggtgattta
acgtccgagcaaaagctaaccacgtcaaatgtcgctcatcctgcacccgagactatcaat
ctggcacaatcaagggcaaggaaccgattcattactcgtaaatgtactaatctttcccac
ttgctgacactaagaagtcaagggacaaaagttggctgcagtacagtatgtggagaatgc
gctcaagagataagctgggaagagctcaacagagatagcaagctagggaagtga
DBGET
integrated database retrieval system
