KEGG   Momordica charantia (bitter melon): 111018345
Entry
111018345         CDS       T05045                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    111018345
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcha03400]
    111018345
DNA repair and recombination proteins [BR:mcha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     111018345
SSDB
Motif
Pfam: XPG_I XPG_N UBM XPG_I_2
Other DBs
NCBI-GeneID: 111018345
NCBI-ProteinID: XP_022150078
UniProt: A0A6J1D8H5
LinkDB
Position
Unknown
AA seq 1604 aa
MGVQGLWELLAPVGRRVSVETLAGKKLAIGIFKSLLSNHTSAIFKMFCLFLSFEDASIWM
VQFIKAMRDERGEMVRNAHLLGFFRRICKLLFLRTKPVFVFDGATPALKRRTLIARRRQR
ENAQAKVRKTAEKLLLNHLKAMRLKELAEDLQNQKQQRRQDVPKKKNLPNHKRTADGTSG
RNKSITTTSSGDHEKLDGMLAASIMAEENGFFTSSSSSFSGAALAKDNSGEESILPLMNE
VDPDVFSTLPSSIQYELLQKQKYKNDSKGKKILSDEIHAVGSDTERMEVASRGAHQQNLD
EMLAASIAAEEAGSLNENASVSAAANLDEDTDDEDEEMILPEMDGVVDPSVLAALPPSVQ
LDLLVQMRERLMAENRQKYQRVKKDPAKFSELQIQAYLKTVAFRRDIDQVQKAASGRGVG
GVQTSRIASEANREFIFSSSFTGDKQVLASRIEKSGDEDLQAPRGQQPLSSLNNTEVPST
SNALARSTPDKTGVFEENIETFLDERGRVRVSRVRAMGMRMTRDLERNLDLMKEIEKNAS
ANEVVNHEPVQNSEICNPKSHSSQSQDLDTPYEGVSESVQLSLRSRGSMLDEDTAIEILL
EDEGDKSFDGDDDLFTHLAAENPIQVASFDKSSQKLSFDGTTDSGWEEAVEGKTYSPKNV
EVDDHPFVEGRVSDESEVEWEEGVCDHVNPVPFGAAESGKSVSKGSLEEEADLQEAIRRS
LKDVGDRKPGSVLSEHQKPESAGKMLEQCTSVQNENVIGLKNVDGADGMSCSKANDSTGR
KETTESSSQEKQCSECIVLLDTTTHTVTEKLDASYKDVSHKDSNENDDTLKPLSRDASGA
VLVGDRINNKLTEPPCHMVGMEDSYTPEVDSSPKVVASENHQNFPVDELSSDILLEENDA
QKPAVEVISNAEIEFTEDELTNRIXILEQERLNLGDEQKRLERNAESVXSEMFAECQELL
QMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYF
MKDVENELGLNRDKIIRMALLLGSDYTEGISGIGIVNAIEVMNAFPEEDGLQKFKEWIES
PDPSILGTLSAQTGLSSRKRGSKASEKDTTCSNSSVGDGSASGEDISEDLKENIDVKQSF
MKKHRNVSKNWHIPSEFPSEXVISAYTCPQVDKSAESFSWGKPDXFVLRRLCWEKFGWDN
SKADELLLPVLKEYSKHETQLRLETFYTFDERFAKIRSKRIKKAVRGITGSKSAVLMDDA
VRAVSANKQRELSVEPQEKSEKCSSEIQGSCSNVDDVEKRLGKPSRKRQLHGEQSQPAKG
QKLTMKEKGNRNRNEGSHKNGRGRGERKGRGRGRLQPKGKMKGSPTTELVETSSSDDENE
FDDQKCDFVNLEEPQERRRSSRIRKSVSYTMGDADQPSDYNGDRFSNDEAKEHDVIHDQS
EKTERDLGTPKRPPQEDYFETGGGFCPVEDEMSQDIDPSLEANNSEDYLRMGGGFCLDDD
NECIDPDAYPGRATVSEDLQDRSEHDPDQSTFHPEKCTSSVQNKEGTDARVDSLLDTGNP
NRVCNPNSSQGGEGVQEEEKDHSVSAFGGALSAMPNLRRKRRKY
NT seq 4815 nt   +upstreamnt  +downstreamnt
atgggagtgcagggtctttgggagctactggcccccgtcggccgccgtgtctccgtcgaa
accctagccggcaagaagctcgccatcggtatattcaaatctctcctttccaatcacacc
tctgcaattttcaaaatgttttgtttgtttctttcctttgaagatgcgagcatctggatg
gtgcaattcataaaggcaatgcgcgacgagagaggggaaatggtccgaaacgcccatttg
ctcggtttctttcgccgaatttgtaaacttctattcttgcggactaagcctgttttcgtc
tttgatggtgcaacccccgctctcaagcgccgtactttgattgcgcgccgtaggcagcgt
gagaacgcccaggctaaagttcgtaagactgccgagaaattgcttctcaatcatctaaag
gcaatgaggttgaaagaactagctgaggatcttcagaaccagaaacagcagaggaggcag
gatgtaccaaaaaagaagaacttgccaaaccataaaagaactgcagatggtacttctgga
aggaacaaaagcatcacaaccacaagtagtggcgatcatgaaaaactagatggaatgttg
gcagcatcgatcatggctgaagagaatggatttttcacaagcagctcttcctctttttct
ggtgctgctcttgctaaagacaacagtggtgaagagtcaatactgccattgatgaatgaa
gttgatccagatgtattttctactctgccttcatcaatacaatatgaactacttcagaaa
cagaaatacaagaatgactcaaagggcaagaagattttgtcagatgaaattcatgcagtg
gggagtgatacagaaaggatggaagtggcctcaagaggtgcccatcagcaaaatttagat
gagatgttggcggcctccattgcagcagaggaagcaggaagtttgaatgaaaatgcatcc
gtatctgctgctgcaaatctggatgaagatacagatgatgaagatgaagagatgattttg
cctgaaatggacggggtagtcgacccttctgtgttggctgctttgccaccatcagttcaa
cttgatcttcttgttcagatgagagagagattaatggcagagaacagacagaaatatcaa
agggtcaagaaggaccctgcaaagttttccgagctacagatacaggcatatcttaaaact
gttgcttttcgccgggatattgatcaagtgcagaaggctgcttctgggagaggcgttggt
ggtgtacagacatcgagaattgcctctgaagcaaacagggaatttatattttcatcatcc
tttacgggtgataaacaggtacttgcatctagaattgagaagagcggagacgaagaccta
caggcaccaagagggcagcaacctttaagttccctgaataatacagaagttcctagtaca
tccaatgctttggctcgatcaacccctgataagacgggggtttttgaggaaaatattgag
acgtttttggatgagagaggacgtgttcgagttagcagggtgagggcgatggggatgcgc
atgacacgtgatttagaaaggaacttggatttgatgaaagagatagagaagaatgccagt
gcaaatgaggttgtgaatcatgaacctgtgcaaaatagtgaaatttgtaatccaaaaagt
cattcttctcaaagccaagatttagatactccatatgaaggtgttagtgaatctgttcag
ttgagtttgagaagccgagggtcgatgctagatgaagacactgctatagaaatattgctt
gaagatgagggtgataagtcttttgatggtgatgatgatctatttactcatttagccgct
gaaaatcctatacaagtggcttcttttgacaagtcatcccaaaaactctcttttgatggt
actacagattctggttgggaggaagcagtcgaagggaaaacttatagtccaaaaaatgtt
gaagtggatgatcacccgtttgtggaaggaagagttagtgatgagagtgaagttgaatgg
gaggaaggagtttgtgatcatgtcaacccagttccttttggagctgctgaatcaggaaag
tcggtttccaaaggttctttggaggaagaggcagatttgcaggaggcaataagaagaagt
ctgaaagatgtaggagatagaaaacctggctctgtactatctgaacatcaaaaaccagaa
agtgctgggaaaatgcttgaacaatgtacgagtgtccaaaatgagaatgtgattggacta
aaaaatgtggatggtgctgatggaatgagttgttcaaaagccaatgattctactgggagg
aaggagacaactgagagttcatctcaagaaaagcaatgttcagaatgtattgtgttatta
gataccacaacccacacagttacagaaaagctggatgcttcttataaggatgtttctcat
aaagattcaaatgaaaacgatgatactcttaagcccttatcaagggatgcatctggtgca
gttctggttggggataggataaataataaattaactgaacctccttgccatatggttggg
atggaagacagttacactcctgaagttgattcctcccccaaagttgttgccagcgaaaat
catcagaattttcctgttgacgagcttagtagtgatattttgctggaggagaatgatgcg
caaaaacctgcagttgaagtaataagcaatgcagagattgagtttacagaggatgaatta
acaaatagaattwcaattctggagcaggaacgtttgaatcttggagatgagcagaaaagg
cttgagcgtaatgctgaatctgtcrgcagtgaaatgtttgcagaatgtcaggaattattg
caaatgtttggcttaccatatattattgctcctatggaagcggaagctcaatgtgcttat
atggaacttgcaaatctcgttgatggagtggtgactgatgactctgacgttttcttgttt
ggggcaagaagtgtttacaagaatatatttgatgaccgcaaatatgttgagacatatttt
atgaaggatgttgaaaatgagcttggtctgaaccgagacaagataattcgcatggcacta
ctacttggaagtgattatacagaaggcattagtgggattggcatagtaaatgccattgag
gttatgaacgcatttccagaggaagatggactccaaaaattcaaagaatggattgaatcg
ccagatccaagcatcttaggcacgcttagtgcacaaacagggttgagttctcgaaaaaga
gggtcaaaagcgagtgagaaggacacaacctgctcaaatagcagtgttggggacggttct
gcatctggagaggacatttctgaagatctgaaggaaaacatagatgttaaacagagtttc
atgaagaagcatagaaatgttagcaagaactggcacatcccttctgaatttcctagtgaa
ayggtcatttctgcttacacctgcccacaagtggacaagtcagcagaatctttctcctgg
ggaaagccagacmattttgtcctccgcagattatgctgggaaaagtttgggtgggataac
tcaaaggccgatgaattgcttttgccagtcttgaaagagtacagcaaacatgagactcaa
cttcgattagagacattttacactttcgacgaacgatttgctaaaatccgcagtaagaga
ataaagaaagctgttagaggtattactgggagcaagtctgctgtattgatggatgacgct
gtgcgggctgtttctgcaaataaacagagagaactttctgttgaacctcaggagaaatct
gagaaatgttcatcagaaatacaaggttcttgttcgaatgtagatgacgtagaaaagagg
ctcggaaaaccatcaaggaaaaggcagctacatggagagcaatctcaacctgcaaagggt
caaaaactaacaatgaaggagaaaggaaatcggaatagaaatgagggatcacataagaat
gggagaggtagaggtgaaaggaaagggagagggagaggacgattgcaaccgaaaggaaag
atgaagggaagtcctactactgaattggttgaaaccagctccagtgatgatgaaaatgaa
tttgatgaccagaaatgtgattttgtgaacttggaggagcctcaagaaaggagaagatca
tctcggatccgaaaatctgtaagttatacgatgggtgatgcagatcaaccatcagactat
aatggtgatagattctccaatgatgaagccaaagagcatgatgtgatccatgaccaatcc
gaaaaaacagaacgtgatctcggaactcctaagagacctccacaagaggattattttgaa
actggaggtggtttctgtccagtagaagatgaaatgagccaggatatagatccttccttg
gaggctaacaacagtgaagactacctcagaatggggggtggattttgcttagacgacgac
aatgaatgcattgacccggacgcgtaccccggccgagcaactgtctcagaagatctccaa
gatcgctctgaacatgatcctgatcaatcaaccttccatcccgaaaaatgtacaagttca
gtccagaacaaggagggtactgatgcacgtgtagactctctgctcgatacgggcaaccca
aatcgtgtatgtaatccaaactcttcccagggaggtgagggtgtgcaagaagaagagaag
gatcattctgtaagtgcatttggaggagctctaagtgccatgcccaatctgagaaggaag
aggaggaagtactga

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