KEGG   Momordica charantia (bitter melon): 111018416
Entry
111018416         CDS       T05045                                 
Name
(RefSeq) RNA-binding protein BRN1
  KO
K13207  CUG-BP- and ETR3-like factor
Organism
mcha  Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcha03041]
    111018416
Spliceosome [BR:mcha03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    111018416
SSDB
Motif
Pfam: RRM_1 RRM_7 BRAP2 RRM_5 RNA_bind RBD_DEAH11 RRM_10 RRM_MARF1
Other DBs
NCBI-GeneID: 111018416
NCBI-ProteinID: XP_022150171
UniProt: A0A6J1DAN8
LinkDB
Position
Unknown
AA seq 437 aa
MAEGVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRG
CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSED
DVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLV
VKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGL
MQYHLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPGVPG
LQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYHIP
QEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAISMMNGCQLGG
KKLKVQLKRDNKQSKPY
NT seq 1314 nt   +upstreamnt  +downstreamnt
atggcggaaggtgttagagagagaagcgcgagtcaggaggaggaagacagcgtcaaactc
ttcgttggtcaagtcccgaagcatatgtccgaaactcagcttctcgcaatgttccaagag
tttgctcttgtagacgaggtcaacatcatcagagacaagaccactcgcgcctcccgaggc
tgctgtttcgtgatatgtccttcgaggcaagaggcggataaggcggtcaatgcttgccat
aacaaaaaaactttacctggggcatctagtccgttgcaagtaaaatatgcagatggcgag
ctggaaagactagaacataaactctttattggcatgcttccgaaaaatgtatctgaagat
gacgtttctggtcttttctctcaatatggaactataaaagacttgcaaatattaagaggt
tcgcagcagacaagtaaaggttgtgcatttttaaagtatgagacgaaggagcaagcagtt
gcagccctagaggcaattaatggaaagtacaaaatggagggttctagtgtccctttggtt
gttaaatgggctgacacggagaaggaaaggcaagcacggaaggctcagaaagctcaatca
cagggttctaatgtgcttaatgcagactcccaacatccttcactatttggagccatgcca
ctgggttatgttccgccatataatggctttggttatcaggctcctggaagttatgggctt
atgcaatatcacctacctccaatacagaatcaatctggtttccacaatatgataccccaa
ctaaaccaaggaaatgcaatgcgtggtatcccgcccgacctcgggccgggtatggctgct
aggaattatggcatgcctcctgcaagttatgttggctctgcctatcctggagttcctggt
ctacagcatcccatggcgtaccctggaggaatgatgagtcccggggttgtgagcagttca
cctggttcagggctacttactggtgggaagagtaactctccaacgtctagtttgggtaaa
ggctctgggggtcagatcgaaggtccacctggcgctaatctttttatttatcacataccc
caagaatttggtgatcaggaacttgctaattcttttcgagcatatggccgagttttgagt
gctaaagtatttgttgacaaaacatctggagttagcaaatgttttgggtttgttagttac
gattcgcccgaggctgcccaatctgccataagtatgatgaatggatgccaattaggtgga
aagaaactaaaagtccagctgaagagagacaataaacagagtaaaccatattaa

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