Momordica charantia (bitter melon): 111018416
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Entry
111018416 CDS
T05045
Name
(RefSeq) RNA-binding protein BRN1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111018416
Spliceosome [BR:
mcha03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111018416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
RRM_5
RNA_bind
RBD_DEAH11
RRM_10
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
111018416
NCBI-ProteinID:
XP_022150171
UniProt:
A0A6J1DAN8
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MAEGVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRG
CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSED
DVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLV
VKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGL
MQYHLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPGVPG
LQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYHIP
QEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAISMMNGCQLGG
KKLKVQLKRDNKQSKPY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggtgttagagagagaagcgcgagtcaggaggaggaagacagcgtcaaactc
ttcgttggtcaagtcccgaagcatatgtccgaaactcagcttctcgcaatgttccaagag
tttgctcttgtagacgaggtcaacatcatcagagacaagaccactcgcgcctcccgaggc
tgctgtttcgtgatatgtccttcgaggcaagaggcggataaggcggtcaatgcttgccat
aacaaaaaaactttacctggggcatctagtccgttgcaagtaaaatatgcagatggcgag
ctggaaagactagaacataaactctttattggcatgcttccgaaaaatgtatctgaagat
gacgtttctggtcttttctctcaatatggaactataaaagacttgcaaatattaagaggt
tcgcagcagacaagtaaaggttgtgcatttttaaagtatgagacgaaggagcaagcagtt
gcagccctagaggcaattaatggaaagtacaaaatggagggttctagtgtccctttggtt
gttaaatgggctgacacggagaaggaaaggcaagcacggaaggctcagaaagctcaatca
cagggttctaatgtgcttaatgcagactcccaacatccttcactatttggagccatgcca
ctgggttatgttccgccatataatggctttggttatcaggctcctggaagttatgggctt
atgcaatatcacctacctccaatacagaatcaatctggtttccacaatatgataccccaa
ctaaaccaaggaaatgcaatgcgtggtatcccgcccgacctcgggccgggtatggctgct
aggaattatggcatgcctcctgcaagttatgttggctctgcctatcctggagttcctggt
ctacagcatcccatggcgtaccctggaggaatgatgagtcccggggttgtgagcagttca
cctggttcagggctacttactggtgggaagagtaactctccaacgtctagtttgggtaaa
ggctctgggggtcagatcgaaggtccacctggcgctaatctttttatttatcacataccc
caagaatttggtgatcaggaacttgctaattcttttcgagcatatggccgagttttgagt
gctaaagtatttgttgacaaaacatctggagttagcaaatgttttgggtttgttagttac
gattcgcccgaggctgcccaatctgccataagtatgatgaatggatgccaattaggtgga
aagaaactaaaagtccagctgaagagagacaataaacagagtaaaccatattaa
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