Momordica charantia (bitter melon): 111018507
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Entry
111018507 CDS
T05045
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111018507
Enzymes [BR:
mcha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111018507
Spliceosome [BR:
mcha03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111018507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
111018507
NCBI-ProteinID:
XP_022150310
UniProt:
A0A6J1D853
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MASPAINAYSIAPKHLWPPLSYPFPTFICPHCSTPPIQTSRFCRLKPLTICSPYPVRFRP
SFHSPRSIFSEKSQLSDVDEDEDEDEDEDDDDDVAAEEYDSDALGGFEQSYDEVDLSIET
TEISTPPEDFKWQRVEKLLSEVREFGEEIVDVDELASIYNFRIDKFQRLAVQAFLRGSSV
VVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGENNVGLLTGD
SAVNKDAQILIMTTEILRNMLYQSVGMASSASGLFHVDVIVLDEVHYLSDISRGTVWEEI
VIYCPKEVQLICLSATVANPDELAGWIGQIHGQTELVTSSKRPVPLTWHFSTKTSLLPLL
DEKGTRMNRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEISYDSTSSMSRQATLSKN
DINTIRRSNVPQVMDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIEGRNLLDECERSEVE
LALRRFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLA
AGINMPARSAVIASLSKRSNNGRTQLSSNELLQMAGRAGRRGIDQKGHVVLIQTPYEGAE
ECCKILFAGIEPLVSQFTASYGMVLNLLAGAKVTHSSEIDETKAFLAGRTLEEARKLVEQ
SFGNYVGSNVMLAAKEELVKIEKEIKMLNLEITEEAIDRKSRKFLSEVAYNEIAELQEEL
RSEKRHRTELRKEMELQRIYALKSLLQNLGDGHLPFLCLQYKDSEGVQHSVPAVLLGNMD
SSKFNNMFPVDNALSAAESNLGINLDPGAESSYYVALGSDNSWYLFTEKWIRTVYKTGFP
NVALTKGDALPRELMRTLLDKEGMXWEKLADSELGSLSCMEGSLETWSWSLNVPVLNSLS
ENDELLQMSSSYMESLERYKEQRNRVARLKKRIARTEGFREYKKVLDMANIIEDKIRQLK
ARSKRLSNRIEQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIA
MVLRNKFLVQLKPTELAAVCASLVSEGIKIRPGRNNSYIFEPSTTVMNMIDFLEEQRSSL
LHLQEKHGVDIPCCLDSQFSGMVEAWASGLTWREMMMDCAMDEGDLARLLRRTIDLLAQI
PKLPDIDPSLQSNASTASNVMNRPPISELAG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcccgccattaacgcttactccatagctccgaaacatctctggccgccatta
tcttatcctttcccaaccttcatatgtcctcattgttcaacgcctccgattcaaacctcg
aggttttgccgccttaaacctctcaccatctgctctccatatccagtccgattccgacct
tcattccactctccgaggtccattttctctgagaagtcccaactctccgacgtcgatgaa
gacgaggacgaggacgaggatgaagatgacgacgacgatgtggcggccgaggagtacgac
agcgatgcattgggtggattcgagcagagctacgatgaagtggatttgtcgattgaaact
acagaaatctccactccgcccgaggatttcaaatggcagcgagtcgaaaagcttctcagt
gaagttagagagtttggtgaagaaattgtcgatgtagatgaactcgcttcgatttataat
ttccgtatcgacaaatttcagcggttggccgtacaagcattcttgagaggatcgtcggtg
gtggtatcagcgcctactagcagtggcaagactttgattgcggaggctgcagctgttgcc
accgtcgcgaggaaacgacgattgttttacacgactccattgaaagcattgtcgaatcag
aagtttcgcgaatttcgtgagacgtttggagaaaacaacgttgggcttcttacaggagat
tctgcagttaataaagatgcccagattttaatcatgacaacagaaattttgcgcaacatg
ttgtatcagagtgttggaatggcctcatctgctagtggactttttcacgttgatgtgatt
gttttggatgaagttcattaccttagtgatatctctcggggcacagtgtgggaagagatt
gttatttattgcccaaaggaggtacaacttatttgtctctctgcaacagttgcaaatcca
gatgagctggctggctggattggtcagatacatgggcaaactgagttagtaacatcatca
aagcgtccagtaccattgacttggcatttctctacaaagacctctttgcttcctctactt
gatgagaaaggaacgcgcatgaataggaagttgtcgctcaattatcttcagcttcatgct
tcaggagctaaattgtacaaggatgatggatcaagaagaagaaacccaaaaaggcatggg
aatgagatcagctatgacagtactagcagcatgtctaggcaagctacactttcaaagaat
gacataaacacaatccgccgttcaaatgttcctcaggtcatggatacattatggcaactc
aagtctaaggatatgctgccagcagtttggtttatatttagcaggaaaggatgtgatgca
gctgttcagtacattgaaggcagaaacctcttagatgaatgcgagaggagcgaagttgaa
cttgcattgaggagattccgtattcaatttccagatgctgtgagggaatcggctgtgaaa
ggacttctgcaaggagttgctgcacatcatgctggctgtctgcctttatggaagtcattc
attgaagagttgtttcaaaggggacttgtgaaggttgtttttgcaacagaaacattagct
gctggaattaacatgccagctcggtcagcagttattgcatccctgagcaaaagaagcaac
aacggtcgtacccagttaagctcaaacgaactgcttcaaatggcagggcgagctggacgt
cgaggtattgatcaaaaaggtcatgtggtgcttattcaaactccatatgaaggcgctgaa
gaatgctgcaaaattctgtttgctgggattgaaccacttgtttctcagtttacggcttca
tatggaatggtcctgaatcttctcgctggtgcaaaggttactcattcaagtgaaattgac
gagacaaaagctttcctagctgggcgaacactggaagaagctaggaagttggttgagcag
agtttcggaaattatgttgggagcaatgtcatgcttgcagcaaaggaggagcttgttaaa
atagaaaaagagattaaaatgctcaatttggaaataactgaagaagctattgatcgaaag
agcagaaagttcttgtcagaggtggcatataatgagatagcagagctgcaggaggaactg
agatcagagaaacgtcacaggacagaactgcgaaaagagatggaactacaaagaatctat
gcgctcaaatctctgttacaaaatttaggagatggacatttgccgtttttgtgtttgcaa
tacaaagattctgaaggagttcaacattcagttcctgcggttctccttggaaacatggat
tcatcaaaatttaataacatgtttcctgttgataatgctttgagtgctgcagaatcaaat
cttggtataaacctggacccaggtgctgaatcatcttattatgtggctctaggttctgat
aactcttggtacctatttactgagaaatggatcagaactgtttataaaacaggctttccc
aatgtcgctttaacaaaaggggatgctttacctcgagagcttatgaggacgcttcttgat
aaagagggaatgargtgggagaagcttgctgactccgagcttggcagtttatcatgtatg
gaaggatctctggagacatggtcttggagtttaaacgtgccagttctgaatagtctttcg
gaaaatgacgaactcttgcaaatgtcttcatcttacatggaatctttagaaaggtacaag
gaacaaagaaatagagttgcacggttaaagaaaaggattgctagaactgaaggattcaga
gagtacaagaaggttttagatatggccaatatcatagaggacaagattagacaactgaag
gccagatcaaaacgactgagtaatcgaattgagcaaatcgaaccatccggttggaaggag
tttttgcagatcagtaatgtgatacatgaaatcagagcattggatataaatactcatgtg
atgttcccacttggagaaactgcagccgcaatacgaggtgaaaatgagctctggattgca
atggttctcagaaacaaattcttggtacaactaaagcctacagaactagctgctgtttgt
gcaagtttagtttcggagggcatcaaaattcgtcccgggagaaacaacagttacatattc
gaaccatccacaacggtaatgaatatgattgatttcctcgaagagcagagaagttctctt
ttacatcttcaagagaagcatggagtggacataccatgctgtctggacagccagttttca
ggtatggttgaggcttgggcttctggtttgacttggagagaaatgatgatggattgtgct
atggatgagggagatctagcacgactcttacgacgaactatcgatttgttggctcaaata
ccgaaattgcccgatatcgacccatctttgcagagcaatgcatcaactgcttctaatgtc
atgaatcgtccaccgatcagtgagttggccggataa
DBGET
integrated database retrieval system
