Momordica charantia (bitter melon): 111018620
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Entry
111018620 CDS
T05045
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111018620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111018620
03012 Translation factors [BR:
mcha03012
]
111018620
Enzymes [BR:
mcha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111018620
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111018620
Translation factors [BR:
mcha03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111018620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
dsrm
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
NACHT
ATPase
Dicer_dimer
NPHP3_N
T2SSE
ABC_tran
Myosin_head
Motif
Other DBs
NCBI-GeneID:
111018620
NCBI-ProteinID:
XP_022150482
UniProt:
A0A6J1DAU3
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MQSSSSLHLLPLPHLSLEFRYAASLPKTLKPYNSHRLTMKDRTPSSNGAVYVPPHLRLRS
VITSSNYSSAAVSAVDCKLKEAPVALLNSGPTAASDLHTRSPELLHTGNSHFNSVHYDSA
YHDDCDYEFSHHPGVSPSVNIDVWKRKLALLLRDKEKQEVVSREKKDRHDFEQIADLASR
MGLFSHLYAKVAVFSKVPLPNYRFDLDDRRPQREVSLPPGLLRRVDAHIGEFLSQKSRLN
GFQDISVSRSSSSGSIATDEGLFEQPELQASSKAVMEKILWRRSLHLRDQQLAWQSSSEG
REMLEFRKNLPAYKEKEAVLSTISQNQVIIISGETGCGKTTQVPQFILESEIESLRGAVC
SIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLL
VDRNLKGITHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLDAELFSSFFGG
AQIIHIPGFTHPVRTHFLEDILEMTGYKLTPYNQIDDYGQEKTWKMSKQAPRKRKTQIAS
TVQDAVMAADFKEYSLQTQESLSCWNPDCLGFNLIEYLLVRICESEIPGAILVFMTGWDD
ISSLKEKLLAHPLLGDSSRVLLLACHGSMASTEQRLIFIKPDKGVRKIVLATNIAETSIT
INDVVYVLDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPGECYHLYPRCV
FDVFAEYQLPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPELLAVQNAIEYLKIIGA
FDESENLTVLGRYLTMLPMEPKLGKMLILGATFNCLDPILTIVAGLSVRDPFLTPLEKKD
AAEAAKSQFSQDCSDHLAIIRAYAGWKEAERNFGAYDFCWKNFLSLQSMKAIDSLRKEFF
SLLRDTGLVDGYSDSYNAWSHDEYLIRAVICYGLYPGVCSVVHNEKSFSLKTMEDGQVLL
YSNSVNARESRIPYPWLIFNEKIKVNSIFLRDSTAISDSMLLLFGGSISKGDHDGHLKML
SGFLEFFMKPDVAETYQKLRLELEELIQKKLLNPKTMDLHSHHELLSAVRLLISEDQCEG
RFVFGRQILKQPPKASTLAAPPPPTSVSRTESGPGGDNSKSQLQTLLTRAGYAAPTYKTK
QLKNNQFRATVEFNGVQIMGQPCTNKKNAEKDAAAEALEWLMGGSKTGHDYVNQMSMMLK
RSKKDHN
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcttcatcttctcttcatcttcttcctcttcctcatctgtccctggaattccgt
tacgcagcttctctccccaaaaccctaaaaccctacaattctcatcgtctcacgatgaag
gaccgcactccttcatccaatggcgccgtttacgtccctcctcacctgcgtctccgctcc
gtcatcacttcttctaattattcctctgctgctgtttcggctgttgactgcaagttgaag
gaggctccggtcgcgctgctcaattcaggacccactgctgcgtctgacttgcacactcga
tctccggaactgctccacaccgggaattcgcatttcaattcggtgcactatgattccgcc
taccacgacgattgtgattatgagttttcgcatcatccgggtgtttcaccttctgtaaac
attgatgtatggaaaaggaagttagcattacttttacgcgacaaggagaagcaagaggtg
gtttctagggagaaaaaggatagacatgattttgaacaaatagctgatttggcaagtaga
atgggactttttagccatctatatgctaaagtcgctgtttttagtaaggttccattaccg
aactacagatttgatttggatgatcggcgtccacagagagaggtctctttgcctcccggc
ttgcttagaagagttgatgcacatattggagaatttctctctcaaaagtctaggttaaac
ggttttcaagatatctctgtctctcgatcgagcagtagtggtagtattgctacagatgaa
gggctttttgagcaacctgagctacaagcatctagtaaggctgtgatggaaaagattctt
tggcggagaagtttgcatttgcgtgatcaacagcttgcttggcagtcatcttctgaagga
agagaaatgctggaattccggaaaaatctccctgcatacaaggagaaggaggccgtattg
tccacaatctcacagaatcaggttattattatatcaggtgaaactggttgtggcaagact
acgcaagttccccaatttattctggaatcagaaatagaatcacttcgtggagctgtttgt
agcatcatatgtacacagccaagacgtatatctgctatgtctgtctctgaaagagttgct
tctgagagaggggagaaattgggtgaatctgttggttataaagtgcggctggagggtatg
aaaggaagggacactcatcttctcttttgcaccaccggcatcttgttgagaagattgttg
gtagatagaaatttaaaaggcataacccatgttattgttgatgagattcatgaacgtgga
atgaatgaagattttctgcttattgtcctgaaagatctccttcctcgccgaccagaattg
aggttgattctaatgagtgcaactttagatgcagaacttttctcatccttctttggaggg
gctcaaataattcacattccgggattcacgcatcctgtccgaactcattttctggaagat
attctagaaatgactggttacaaattaactccatacaatcaaatagatgattatggtcaa
gagaaaacgtggaaaatgagcaaacaagcaccacgaaagaggaaaactcagattgcctct
actgtccaggatgcagttatggctgccgattttaaggagtacagtcttcaaactcaggag
tctttatcatgttggaatccagattgtcttggttttaatctcatagaatatcttctagtc
aggatatgtgagagtgaaattcctggagctattcttgtttttatgactgggtgggatgac
atcagttctctgaaggaaaaacttctagctcaccctttactaggtgattcaagtcgtgtt
ttgttgctggcatgccatggctctatggccagtacagagcagaggttaatatttattaaa
cctgacaaaggagtgaggaagatagtgcttgcaacaaatattgctgagactagtatcacg
ataaatgatgttgtgtatgttctggactgtggaaaggcgaaagaaacatcatatgatgct
ttaaataacactccttgtctgcttccctcttggatatccaaggtttctgctcaacaaaga
agaggaagggctggccgtgttcaaccaggagaatgttatcatctataccctaggtgcgtg
tttgatgtttttgctgagtatcagctgccagaaattttgagaacacctttacagtccctc
tgcttgcaaataaaaagtttaaagcttggaagtatatcagagtttctatctagggctttg
cagtcaccagaactactagcggttcagaatgctattgaatatcttaaaatcattggggca
tttgacgagagtgaaaatcttacagttttaggtcgttatttgaccatgctcccaatggag
ccaaaactgggaaagatgttgatattaggtgctaccttcaactgtttggatccaattttg
accattgttgctggtctcagtgtgagagacccttttctaacaccactggagaagaaggat
gctgcagaggctgcaaagtctcaattttcacaagattgcagcgatcaccttgctattatc
cgggcttatgcgggatggaaagaagctgaaaggaactttggtgcatatgacttctgttgg
aagaactttctttctttacaatcgatgaaggctattgattcactaaggaaggagtttttc
tctttgctcagagatactggcttggttgatgggtactcagactcttacaatgcttggagt
catgatgaatacctcatacgtgcagttatttgctatggcctatatcctggagtttgttct
gttgtgcataatgagaagtcattttctctcaaaactatggaggatggccaggtgcttctc
tattcgaactcagttaatgctcgagagtcaaggattccatatccatggctaatcttcaat
gagaagataaaagtgaactccattttccttcgagattcaacagccatctctgactcaatg
ctgcttctctttggtggaagcatctcaaaaggtgatcatgatggacacttgaaaatgttg
agcgggtttttggaattttttatgaaacctgatgtagcagagacatatcagaaattgaga
ttggaacttgaagagcttatacagaagaaactactaaatccaaagacgatggacttgcac
tcccaccatgagctcctatctgctgtacgtttgcttatttcagaagaccagtgtgaaggt
cgatttgtttttggccgccagatccttaagcagccccccaaggcatctactctggcagca
ccaccaccaccaacttctgtttcaagaactgaaagcggacctggtggtgataattccaag
agtcaactccagactttactcacgagggctgggtatgctgcacccacttacaagactaag
caactgaagaataatcaatttcgagcaaccgtggaatttaacggagtgcaaattatggga
caaccttgtaccaacaaaaagaacgcagaaaaggatgctgcagctgaggctcttgagtgg
ttgatgggtggaagtaagacagggcacgactatgtcaaccaaatgtccatgatgctaaaa
aggagcaagaaggatcataactga
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integrated database retrieval system
