KEGG   Momordica charantia (bitter melon): 111018785
Entry
111018785         CDS       T05045                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
mcha  Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcha03400]
    111018785
DNA repair and recombination proteins [BR:mcha03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    111018785
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 UBA_RAD5A zf-C3HC4_4 zf-RING_UBOX DEAD zf-C3HC4_2 zf-RING_2 ResIII zf-RING_5 Prok-RING_4 RING_XB3-XBAT31 CUE zf-ANAPC11
Other DBs
NCBI-GeneID: 111018785
NCBI-ProteinID: XP_022150723
UniProt: A0A6J1DA72
LinkDB
Position
Unknown
AA seq 1140 aa
MEANGILEEKIKKVRSAVGPELPESFIVRTLSRNGDDSDEAIKYILQNPGFLAKPLTVVR
TVTSTGARVSAQIKQDDDPMESKEEAKPTGTNSTVRVKEEPVSGLEDEGVESGEVSSDRP
KVLPKVIGTSRMTFEEFIQLTNTKIMSDEECRKILKENPAAVGVKPSSLSSAKVEVKEEV
VETIAQPGANANARVKEEPDLEFKNRVFAKEATAGTEKVPILVPGKSKMHSVDSSSIQKK
GTVSNDGRCKVEDGDFPVEPDWFLVGRTMVTAMSTTKGNKLADNEIVSFAFHSSSSRFNA
QWIVRFSTKRHGEIGRLPMEWAKCVVPLVNSGKVKILGRCIAAPGNLHIMQEILLYVSFY
IHRSVFSDIDTASWKLEATHIDSTIYPLLTLFKLLKIKPYQKAEFTPEELDSRKRLLKLE
DDPDESASMLPIVKRRKGCQQFADQNKDDQTLNESSLTKLVGAADMYNLDEMEPPLTLTC
DLRPYQKQALYWMSELEKGIDVEKAAQTLHPCWAAYRVCDERAFSIYVNIFSGESTTKFP
TATQMARGGILADAMGLGKTVMTIALILARMGRGCLDNRKPAVNKNDATEKRSPNSTDKA
KGGTLIVCPMALLGQWKEELETHSEPESISIFVHYGGDRTNNPDVLSGYDVVLTTYGVLT
SAYKSDGECSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLE
DLFSLLCFLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDAKGR
PILVLPPTDIQTVTCKQSEAERDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLR
QCCNHPFLVMSRGDLQQYANLNKLARRFLESNSDSITMEQAAPTRAYVEEVVECIRWGEN
TECPICMEFADDPVLTPCAHRMCRECLLSSWRTPTTGLCPICRQLLRKTDLVTCPSESPF
RVDVEKNWKESSKVSKLLECLEQIHQSGSGEQSIVFSQWTMFFDLLEIPLKRRKIGFFRF
DGKLSQKQRERVLKEFSESKEKKVMLISLKAGGVGLNLTAASNVFIMDPWWNPAVEEQAI
MRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRTARIEELKMLFR
NT seq 3423 nt   +upstreamnt  +downstreamnt
atggaggcaaacggcattctagaagagaaaatcaagaaggttcgatcggcggtaggcccc
gagttaccggaatcattcatcgtgaggactctgtcgaggaacggcgacgattcagatgag
gctattaaatacattctccaaaatcctgggttcttggccaaacccttgactgtcgtgcgg
acggtcacgagcaccggtgctcgagtttcggcccagattaagcaggatgatgatcctatg
gagtccaaggaagaagcgaaaccgactggaacaaactcaacggtccgagtaaaggaggaa
ccggtttcagggctcgaagacgaaggcgtagagagcggggaagtgagctcggatcgccca
aaggttttgcctaaagtaattggaacgtctagaatgacattcgaagaatttattcaactg
acgaacacgaaaattatgagtgacgaggaatgtcgcaagatcctaaaggaaaatccggct
gcagtgggggtaaaaccgagcagcctttcaagtgcgaaggttgaagtaaaggaggaagtg
gttgagacgattgcacaacctggtgctaatgcaaatgcgagagtgaaggaagaaccagat
ttggagtttaagaacagagtatttgcaaaagaagcaaccgcaggaactgaaaaagttcca
attttggttccaggaaagtctaaaatgcattcggttgattcaagtagtatacagaagaaa
ggaacagtgtctaatgatgggagatgcaaggtggaagatggggatttcccagttgagcca
gattggtttttggtgggaaggacaatggtcacggccatgtccacaacgaaggggaataaa
ttggcagacaatgaaattgttagttttgcatttcattcttcaagctcaagatttaacgcg
caatggattgttcgattctcaacaaaacgtcatggagagatcggtcgcctaccaatggag
tgggcaaaatgtgtagttccacttgtcaactccgggaaagttaaaattcttggacggtgt
atagctgcaccgggaaaccttcacataatgcaagagatcctgctatatgttagcttttat
attcatcgctcggtattctcagacattgatacggcttcatggaagttggaggccacacac
attgactctacaatttaccctcttctaacccttttcaaattactgaaaatcaaaccatac
cagaaggctgaatttactccagaagaacttgattcacggaagcgcctgctaaagcttgaa
gacgatccagatgaatcagcatcaatgctacctattgtgaagcgaagaaagggttgccag
caatttgcagatcagaacaaagatgaccaaactcttaatgaatcgtcactgactaagctt
gttggtgcagcggatatgtataatttggatgaaatggagcctccacttacactgacatgc
gatctaaggccttatcagaaacaagctctttactggatgtctgagttagagaaggggatc
gatgttgaaaaggctgcacaaacccttcatccatgctgggcagcctatcgtgtttgtgat
gagagagcgttctcaatttatgtgaacattttctccggggagtcgactacaaaattccca
actgctacgcagatggcaagaggagggatactcgcagacgctatggggcttggcaagact
gttatgacaattgctctaatacttgcgagaatggggagaggatgtcttgataaccgaaag
cctgctgtgaataagaatgatgctactgagaagaggagtccaaattccaccgataaagca
aagggtggcactcttattgtttgtccaatggctttgttgggccaatggaaggaggaactt
gaaacacattcagagcctgagagtatttccatatttgttcactatggtggtgacagaacc
aataaccctgatgtgttatcaggatatgatgttgtcttgacaacgtatggtgtcctaacg
tcggcctataagagtgatggagagtgtagtatttaccacagagttgattggtacagagtg
gtgctagatgaagcccatacaattaaatcatcaaagacacaaactgcgcaggctgccttt
acgttgaactcgtattgtcgatggtgtcttacaggaacccccctccagaataacttggaa
gaccttttcagcctcttatgcttcttgcgggtggagccatggtgcaattgggcatggtgg
aacaaattgattcaaaggccttatgaaaatggtgatcctagaggcttgagactgatcaag
gctatcttgaggccacttatgttgaggagaactaaagatacaaaggatgcaaaaggaagg
cctattcttgttctccctccaactgatattcaaaccgtcacgtgcaaacagtcagaggct
gaacgtgatttttatgatgcactttttaagagatccaaagtccaatttgaccagtttgtg
gctcaaggaaaggttctccacaactatgcaaacatcctagagctattgctccgacttagg
cagtgttgcaaccacccatttcttgtaatgagccgaggagatttgcaacagtatgcaaac
ttgaacaagcttgcaagaaggttcctcgagtccaacagcgattctatcacgatggagcag
gctgcacccacccgagcatatgtggaagaggttgtagagtgcattcggtggggtgaaaac
actgagtgtcctatatgtatggagtttgctgacgaccctgtgctcaccccatgtgcgcac
aggatgtgcagggagtgtctcctctcaagctggaggactccaacaactgggctgtgccca
atttgtaggcaattgctcaggaaaaccgacctcgtaacatgtccatcagagagtcctttt
cgcgtggacgttgagaagaactggaaagagtcttcaaaagtatcaaaactgctggaatgc
ttggaacagattcatcagtcgggttcaggtgaacagagcattgtttttagccagtggacc
atgttttttgatcttctagagatcccgttgaagagaagaaaaattggattctttagattt
gatggaaagttgtcgcagaaacaaagggaaagagttctaaaagagttcagtgaaagcaag
gagaaaaaggtgatgctaatatctctgaaagctggtggggttggattgaatctaaccgca
gcttcgaatgtcttcataatggacccatggtggaatcctgcggtcgaggaacaggcaatc
atgagaattcatcgtattggccagaagagaacagtccgtgtcagaagattcattgtcaag
gacaccgtggaggaacgcatgcaacaagttcaggccaggaagcagcgaatgatcgccggt
gccctcactgacgaggaagttcggacggccaggattgaagagctcaagatgctttttaga
taa

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