Momordica charantia (bitter melon): 111019139
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Entry
111019139 CDS
T05045
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111019139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111019139
Spliceosome [BR:
mcha03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111019139
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
111019139
NCBI-ProteinID:
XP_022151138
UniProt:
A0A6J1DBC9
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All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MATLADSFLADLDELSDEDNFLDEEDVDAENMEEDIDGDLADLESLNYDDLDSVSKLQKT
QRYNDIMQKVEGALQKDSNISNQGLVLEDDPEYQLIVECNSLSVDIENEIIIIHNFIRDK
YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
PEEILQKTIDACDRALALDSAKKKVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA
ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS
TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK
IRKN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctactttggctgattctttcctagcagatcttgatgaactctctgatgaagacaat
tttctggatgaagaagatgtcgatgctgaaaatatggaagaggatattgatggggacctt
gccgacctagaaagccttaattatgatgatctggatagtgtatcaaaattgcagaaaacg
cagagatacaatgatataatgcagaaagtggaaggtgcattgcagaaggattctaacatc
tccaatcaaggattagtcttggaagatgatcctgagtaccaactgattgtggagtgcaac
tctctgtcagtggatattgagaatgaaattattattattcacaattttatacgtgataaa
tatcgattgaaatttccagagcttgaatcacttgtgcaccacccaatcgattatgctcga
gttgttaaaaagattgggaacgaaatggatttgactcttgttgatctagaaggcctttta
ccctctgctgtcattatggttgtctcagttactgcatccaccacaagtggcaagccgctt
ccagaagaaattctccagaaaacaattgatgcatgtgaccgagctcttgctttagattca
gcaaagaaaaaggtccttaattttgttgaaagtagaatgggatatattgcaccaaatctt
tcagccatagttggaagtgctgttgcagcaaagctaatgggaactgctggtggtcttgct
gctttagctaagatgcctgcttgcaatgttcagcttcttggtgcaaagaaaaaaaatctt
gctgggttttccacagcgacctcacagtttcgggtaggttatattgagcaaacagagata
ttccaatcaacacctcctcctttgaagatgcgtgcttgtcgactcatagctgcaaaatca
acacttgcagcacgtgttgactctaccaggggggatcctactgggaagactggaagagtt
ttcaaagacgagatccttaagaaaattgagaagtggcaagaacctccacctgcaaaacaa
ccaaaacctcttccagtccctgattcagaacccaaaaagaagagaggtgggcgtcgacta
aggaagatgaaggaaagatatgcaacaacagagatgaggaagctagccaacagaatgcag
tttggggtgcctgaagagagttctttaggagatggattaggggaagggtatggaatgctt
gggcaggctgggagtggcaagctgcgtgtgtcagctgctcaaagcaagcttgccgctaaa
gttgttaagaagttcaaggaaaaacgttatggtagcagtggtgctacatccgggctgaca
tcaagtttagcatttacacctgtacaagggattgaactgtcgaatcctcaggctcatttg
aaccagctaggcagtggaactcagagcacctacttttccgaaacaggaacattttcaaag
atcaggaaaaactga
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