Momordica charantia (bitter melon): 111019157
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Entry
111019157 CDS
T05045
Name
(RefSeq) pre-mRNA-processing factor 17 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111019157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111019157
Spliceosome [BR:
mcha03041
]
Complex C
Other components
Step II factors
111019157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
111019157
NCBI-ProteinID:
XP_022151167
UniProt:
A0A6J1DCR6
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MDLLQSYTDQKDENHDGSPKQVTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLS
KPIDPTQHIVAFNPTYDQLWAPIQGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQ
YNTFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED
VEMDLNPDEVENPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGE
KAEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF
FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI
KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ
HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL
AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctccagtcatacacagatcaaaaagacgagaaccatgacggaagccctaaa
caggttacatcttcgccagaagcctctccgccccggctacttccctccaaaacctcggca
cccaaggttgacgatacaatgttagccctcacggtggccaacgccaaccggaccctctcg
aagccaatagacccaactcaacatattgttgccttcaaccccacctacgaccagctctgg
gcgcccattcagggtccatctcatccctatgccaaggatggcattgcgcagggcatgcga
aaccacaagctagggttcgttgaggatgcgtccattgaaccatttgtcttcgatgagcag
tacaacactttccacaaatatggatatgctgctgacccctcagcttctgctggaaacaat
tacattggcgacatggaggctttgcagaagaatgatgccatctccgtgtataacatccct
cagcacgagcagaagaagaggaagatcgagaagaagaaggaaatgagtgagaatgaggat
gtggaaatggatttgaacccggatgaagttgaaaatccagctagtgatgtgtggttgatg
aagaatagaaagagtccatggtctgggaagaaggaaggtctgcaaactgagctcactgag
gagcagaagaagtatgcggaagagtatgcaaagaagaaaggtgaagagaaaggtggtgag
aaggcagaagttacagcggataagagtacttttcacggtaaagaggagagggattatcag
ggcaggtcttggattgcacccccgaaggacgccaaggccacaaatgatcattgttatata
cccaaaagattggtgcatacttggagtgggcacacaaagggtgtatctgctattaggttc
ttccccaaacatggtcatttgattctttcagctggtatggataccaaggtgaagatatgg
gatgtgttcaattctggaaaatgtatgagaacctacatgggtcactcgcaggcagttcgg
gatatttcattttgtaatgatgggtctaagtttttgactgcgggatatgataaaaagatt
aagtattgggatacagaaacagggcaagtgatatcaaccttctccaccgggaaaattcct
tatgtcgttaagcttaatcctgatgatgataagcagaacatattgttggcagggatgagt
gataagaagattgttcagtgggatatgaacacgggccagattactcaagagtacgatcaa
catttgggagcagtgaataccattacatttgtagacaataatagaaggtttgtcacatca
agtgatgacaagtccctccgtgtttgggaatttgggatcccagttgttattaagtatatt
agtgagccccacatgcattccatgccttccatttccgttcaccccaatacaaattggctc
gcagcacaaagtttagacaatcaaattcttatttatagcactagggagagatttcagcta
aataagaagaagaggtttgccgggcacattgtggctggatatgcttgccaggtcaatttt
tcaccagatggacgttttgttatgtcgggtgatggtgagggtaaatgctggttttgggac
tggaaaacttgcaaggtattcagaactctcaagtgtcatgaaggggtatgcattgggtgt
gagtggcatccattggagcaaagtaaagtagcaacgtgtggctgggatggcctgataaag
tattgggactag
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integrated database retrieval system
