Momordica charantia (bitter melon): 111019283
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Entry
111019283 CDS
T05045
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111019283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111019283
Spliceosome [BR:
mcha03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111019283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_TEP1_C
NBCH_WD40
PRP4
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_SCAP
WD40_like
Motif
Other DBs
NCBI-GeneID:
111019283
NCBI-ProteinID:
XP_022151320
UniProt:
A0A6J1DAU7
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MEVDDQNPASTSAESPETLPDGENVVDLDSPSEPIQPAASSVIPPPIVPAIAPIPPPPVI
RPLAPLPSRPPLFRPPVAQNGELRTSDSDSEHDDLAPSRAAPGSAADYEVSEESRQVRER
QEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDA
EGQLEKLLKAHEEEEAAATAGTEDAEEEVLQYPFYTEGSKALLNTRLDIAKYSIVRAASR
LERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLS
GVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLRTFEG
HLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVS
SCGLDALARIWDLRTGRSILALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKS
LYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDII
ADGQGIATVSHDRTIKLWSVNNKDEQTMDVD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgatgatcaaaaccctgcatcaacttctgcagaatctcccgaaactcttcca
gatggtgaaaatgtggtggaccttgacagcccatcagaaccgatccaacctgcagcttca
tcagttattccacctccaattgtgcctgccattgctcccattcctcctcctccagttatc
cgtccattggctcctctgccaagccgacctcccctcttcagaccccctgtagcacaaaat
ggtgagttgagaacaagtgactcagactcggaacatgatgatttagccccttcgcgagca
gctccaggttcagctgcagattatgaagtgtcggaagagagcagacaggtgagggagcgt
caggaaaaggcgatgcaggaatttcttatgaagcgtcgtgcttctgctctagcagtgcct
actaatgacatggccgttcgggctcgtcttcgtcgtcttggtgaacccataactcttttc
ggggaaagagaaatggaaagacgggacaggttgcggtcaataatggcgagattggatgct
gaagggcaattagagaagctgctgaaagctcatgaggaagaggaggctgcagctactgct
ggaactgaggatgctgaggaggaggtgcttcagtatcccttttatactgaggggtccaaa
gctctcttgaataccagacttgatattgcaaagtattcaattgtgagagcagcttcgcgt
cttgagcgtgcaaagaggaaaagggatgacccagatgaagatgtggaagcagaaatggat
tgggcactgagacaggctggaagtttggtccttgactgcagtgagataggagatgatcga
ccactttctggttgttctttctcgtctgatggaaaattccttgccactagttcattaagt
ggagttgcaaaattgtggagcatgcctcaagtaaggaaggtttccaactttaagggacac
acggagcgtgttaccgatgtaatgttttctcctgtgaatgagtgtttagcaactgcctct
gctgaccgaactgcaaggttgtggtctgctgaaggatctctccttagaacattcgagggt
catctggatcgccttgcccgaattgccttccatccatctgggaagtacttgggcacaact
agctttgacaagacttggagattatgggacgtggaaactggtgtagagttgcttcttcaa
gaaggtcatagtaggagtgtctatgggatagcctttcaccatgatggatccttagtatca
tcttgtggacttgatgcacttgctcgtatttgggaccttcgaactggcagaagtattctt
gcgttggagggccatgtcaagccagttcttggagtcagcttttcacccaatggttatcat
ttagctactggtggtgaagataacacttgtagaatatgggacttaaggaagaaaaaatct
ctatacataatacctgcacactcgaaccttgtttcacaagtgaaatatgagcctcaagag
ggatacttcttggtaactgcatcatttgatatgacagcaaagatttggtcggctcgagat
tttaagccagtgaagacactctctggacacgaagcaaaagttacatctttggacatcatt
gcagacgggcagggtatcgcaacagtctcacacgatcggaccataaagctctggtctgtt
aataataaagacgaacagaccatggatgtcgattga
DBGET
integrated database retrieval system
