Momordica charantia (bitter melon): 111019593
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Entry
111019593 CDS
T05045
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111019593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111019593
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111019593
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
111019593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
CHASE5
Motif
Other DBs
NCBI-GeneID:
111019593
NCBI-ProteinID:
XP_022151677
UniProt:
A0A6J1DE54
LinkDB
All DBs
Position
Unknown
AA seq
196 aa
AA seq
DB search
MKEAEETQFVTPGEVLGKPSDLKSGKGAYVANNTVYASLSGFRRILPPPPNSSDSRPTVE
VTGHKAHGAVPAPGSVVIARVTNVMSRMASADIMCVGPKSVKEKFTGIIRQQDVRATEID
KVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQCP
LTGQIQQRKVAKVGGG
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggccgaggagacgcagttcgtgactcccggagaagtgctcggaaagccttcg
gacttgaaatctgggaaaggagcttatgttgccaataacactgtttatgcttctctttct
ggtttccgccgcattcttcctcctccacccaactcttccgactcgagaccaactgtggaa
gtgaccggtcataaggcccatggtgctgttccagctcctggatctgtcgtcattgctcga
gttacaaatgtaatgtccagaatggcatcagctgatattatgtgtgttggtccaaagtct
gtgaaggaaaagttcaccggaattatcaggcaacaagacgtccgagcaactgagatagat
aaagtagatatgcatttgtcgtttcgtccgggtgacatcgtcaaagctcttgttctttct
cttggagatgcaagggcttatcatctatcaactgcaaaaaacgaacttggtgtcgtctct
gcagaaagtacagcaggtgcagtaatggttcccataagttggacagaaatgcagtgtcca
ctaacaggccaaattcagcaaagaaaagttgccaaagttggaggaggatga
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integrated database retrieval system