Momordica charantia (bitter melon): 111019638
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Entry
111019638 CDS
T05045
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111019638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111019638
03041 Spliceosome [BR:
mcha03041
]
111019638
03032 DNA replication proteins [BR:
mcha03032
]
111019638
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
111019638
Spliceosome [BR:
mcha03041
]
Complex A
U1 snRNP components
Sm proteins
111019638
U2 snRNP components
111019638
Complex B
U1 snRNP components
111019638
U4/U6.U5 tri-snRNP components
111019638
Complex C
U2 snRNP components
111019638
DNA replication proteins [BR:
mcha03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111019638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
111019638
NCBI-ProteinID:
XP_022151728
UniProt:
A0A6J1DDX8
LinkDB
All DBs
Position
Unknown
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQAAGRGS
ATGRGAMPSARR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggagcttgggaattccagtgaagctactccatgaggccgcgggccacgttgtg
tcggtggagcttaaaagtggcgagctttatagaggaagtatgatcgagtgcgaggataac
tggaactgccagctcgaaaacatcacctacactgctaaggatgggaaggtctcacagctt
gagcatgttttcatccgaggtagcaaagtcaggtttatggtcataccagacatgctgaag
aatgctccaatgttcaagcgtcttgatgctagaattaagggtaagggcgcctcacttggt
gttggcaggggcagggctgttgctatgcgagctaaagctcaagctgctggccgtgggagt
gcaactggtcggggtgccatgccatctgcccgaaggtga
DBGET
integrated database retrieval system
