Momordica charantia (bitter melon): 111020101
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Entry
111020101 CDS
T05045
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111020101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcha03009
]
111020101
Ribosome biogenesis [BR:
mcha03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111020101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
111020101
NCBI-ProteinID:
XP_022152358
UniProt:
A0A6J1DEN5
LinkDB
All DBs
Position
Unknown
AA seq
1056 aa
AA seq
DB search
MDSNTLMGPMELKVRELLKEFQLDYSPALVKRVEDTVSAIKNAIKLIPDDSKVTADEAPG
FISDIGADKVEFKFRKPNSIKIGGSYAFRGIAKPDVNVDLLVGLPKECFHEKDYLNYRYY
AKRFLYLCTIKKYLNSSLVLSKVEWSTLQNEARKPILIVYPALEGLKVAPGFFVRIIPTI
AGSFFSISKLNIKRNNIRALNQGSLLQATPKYNTSILEDMFFEDTAEMVKTPFLESKDLV
ETLILLKVWARHRAPIYVHDCLSGFLIAVILSYLVNQNIITHSMTVIQMFRVAVKFMATS
NLWNRGLYFKLGPQSTISKEEKKQYKDLFPVVICNPSANFNIAFRISQSGFAELQDEAAL
ALACLEKCRNGGFEEIFMTKIDFAVKYDHCIRLNLRGQDKLYASGFCLDDECWRLYEQKV
HGLLSQGLADRAKFIRVSWSNTEAGRNIENGLSVYGTQPLLVGISISSVEKAFRVVDIGP
DAENKEEALKFRRFWGEKAELRRFKDGRIAESTVWETDQWTRHLVLKRIAEYVLVRHLSP
ISKDHIMHAVDQIDFSLLHGSGDPITFSGNLLAAFEVLSKRLRSIEDIPLKVSAVQPLDP
AFRYTSVYPSEPHPLAEEKASDPRIQRKVASSCIRPLDVMIQLEGSGNWPTDEVAIEKTK
TAFLLKIGESLQNVWGMRCIASEDAVNVLVSGYAFHLKIWHERGLSLLNKEFGSDLSNWI
SSTDKKLFVQSQHSSMISGLQARHSIYGPVVRLAKRWIASHFFSACLVEEAVELLVASIF
LKPLPFHAPLSRITGFLRFLRLLSEYDWTFSPLVIDINNDLGANEEKEIADKFNLTRKDF
QENPQTASPAMFLATAYDKASEAWTTFFPKPLELKRLVAYARSSADLLTRLIVQQQVDSY
QWECIFRTPLTNYDAVILLHRDKLPYPQRLLFPSELNQGIHVAKGDPSKIFSPFLLPRNL
KPNSEDIKNKLLVNFDPLRCYIADLQKEFSSTFNIWYDSLGGDAIGLTWGQHNSKKRGRD
EAVEAEKEPAEVLKAVGETGKGLMRSIYLLKAPKLI
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggattccaacactcttatgggtcccatggaattgaaggtcagagaacttctaaaggag
tttcagcttgactactcccctgctttggttaagcgcgtcgaggacacagtttctgctatc
aaaaacgcaattaagctcatccccgatgactcgaaggttactgcggatgaagctccgggt
tttatcagcgatattggcgcggacaaagtggaattcaaatttaggaagccaaattcaatt
aaaattggtggtagctatgcctttcgaggcattgcaaaacctgatgtaaatgtagatctt
ttagttggcttgccaaaggagtgtttccatgagaaagactacctgaattaccggtactat
gccaaaaggttcctttacctttgcacaatcaagaaatatttgaactcatctttagtgctt
tctaaggttgaatggtctacacttcagaatgaggctcgaaaacccatcttaattgtctat
ccagctttggaaggactcaaggtagctcctggattttttgtcagaataattccaacaata
gcaggatcctttttcagcatttcaaagttgaatatcaaacgaaacaatatccgtgccttg
aatcaagggagcttacttcaagctacacctaagtataacactagcattttggaagatatg
ttcttcgaggatactgcagaaatggttaagacgccttttcttgaatcaaaagatttggta
gagacgttaattctactgaaggtttgggctcggcacagggctccaatatatgttcatgat
tgcttgagtggattcttaatagctgtaatattatcatacctcgttaaccaaaatataata
actcattcaatgactgtgatccagatgtttcgtgttgcagtaaaatttatggccacttcg
aatttatggaatcgtggactctattttaagcttggacctcagagcactatttcaaaggag
gaaaagaagcaatataaagatctatttcctgtggttatatgcaatccgtcagccaacttt
aacattgcatttcgaatatcacaatcaggttttgctgagcttcaagatgaggctgctctg
gcacttgcatgtttggagaagtgcagaaatggtggatttgaggagatttttatgaccaaa
attgactttgctgttaaatatgaccattgcattagattgaatttgaggggacaagacaag
ttatacgcatcaggcttttgtttggatgatgagtgttggagactgtatgaacagaaagtg
catggacttttaagtcaaggtctggctgatagagcaaaattcattcgtgtttcctggagc
aacactgaagctggacgtaatattgaaaatggtttatcagtatatggtacgcaaccattg
cttgttggaatttcaatcagctccgtggaaaaagcttttcgtgtggttgatattggtcct
gatgctgaaaacaaagaagaggccctaaaatttcgtagattttggggtgaaaaggctgag
ctcaggagatttaaagatggcagaattgccgaaagcacagtttgggaaactgatcaatgg
acaaggcatctcgttttaaagagaattgcggaatatgttcttgttcgacatctttcacca
atatcaaaagaccatattatgcatgctgtggatcagattgatttctccctgctccatggt
tctggagatcctataacattttctggaaatttgctcgcggcttttgaagttttatcaaag
cgcttgcgttcaattgaagacattcctttgaaggtgtctgctgtacagcctttagaccca
gctttcaggtatacatctgtctatccttctgaacctcacccactagcagaagagaaggca
agtgatccacgaatacaacggaaggttgcctcatcctgcatccggccactagacgttatg
attcagctggaaggctctgggaactggccaactgatgaggttgcaattgaaaaaaccaaa
acggccttccttcttaaaattggagagagtctgcagaacgtctgggggatgaggtgtatt
gcttctgaagatgctgttaacgtacttgtctctggttatgcttttcatctaaaaatttgg
cacgaaagaggcctgagtttgttgaataaggaatttggaagtgatttatcaaattggatc
tcctcaacagataagaaactttttgttcaaagtcagcattctagcatgattagtggatta
caggctcgtcactcaatatatggaccggttgttaggttggcaaaaagatggatagcctca
catttcttttcagcttgcttggtagaggaagcagtcgaactgttggtagcatcaattttc
ctgaagcctctacccttccatgcaccactttctcgaatcacaggttttctaaggttccta
agattactgtcagagtatgattggactttttctccactggttattgacataaacaatgat
ttgggtgcaaacgaggagaaagaaatagctgataaatttaacctgactcgaaaagacttt
caagaaaatccacaaactgcaagtcctgccatgttcttagcaacagcttatgacaaggca
tctgaggcttggaccacgttctttccaaaaccactggagctaaaaaggctggttgcttat
gctagaagcagcgcagatttgttgacaagactaatagtgcagcaacaggtcgattcttac
cagtgggagtgcattttccgaactccattgaccaactacgatgccgttattcttctccac
cgagacaaattaccttacccacaacgtcttctcttcccgtctgaactgaaccaaggaatt
catgtcgcaaaaggggatcctagcaagatattctctccattcttgttgcctagaaacttg
aaaccaaattctgaagacataaagaataagcttttggtaaattttgatccattaaggtgt
tacattgcagatttgcagaaagaattctccagcactttcaacatatggtatgactctttg
ggaggtgacgcaattggtctaacatgggggcaacataattcgaagaagcgtggacgtgat
gaagctgtcgaggcagaaaaagaaccggctgaggtgctaaaagctgttggtgaaactggc
aagggcttaatgaggagcatctacctactcaaggctccaaagctcatatga
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