KEGG   Momordica charantia (bitter melon): 111020200
Entry
111020200         CDS       T05045                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
mcha  Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcha03041]
    111020200
Spliceosome [BR:mcha03041]
 Complex B
  Other components
   Complex B specific factors
    111020200
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 LisH_TPL Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_NWD2_C Ge1_WD40 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_WDR75_2nd DUF7165 VPS8_N Beta-prop_HPS5 Beta-prop_LRRK2 Beta-prop_IFT122_2nd Beta-prop_IP5PC_F zf_topless 7TMR-HDED
Other DBs
NCBI-GeneID: 111020200
NCBI-ProteinID: XP_022152482
UniProt: A0A6J1DGD4
LinkDB
Position
Unknown
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAI
LPQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEH
LLVRTYFDPNEAYQDSTKEKRRAQIAQALAAEVTVVAPSRLMALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVEDVYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSVDGFIEV
WDYISGKLKKDLQYQADETFMMHDDPVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLR
RLERAHSQGVTSVVFSRDGSQLLSTSFDTTARIHGLKSGKLLKEFRGHSSYVNDAVFTND
GARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSVHIFPKNADHIIVCNKTS
SIYVMTLQGQVVKSFSSGKREGGDFVAACISPKGEWIYCIGEDRNMYCFSVQSGKLEHLM
KVHEKDVIGVSHHPHRNLVATYSEDSTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctacactcgaaatcgaagctagggacgtcatcaagatcgtgcttcagttttgtaaa
gaaaattcattgcaccaaacattccagacgttacagaatgagtgtcaggtttctttgaat
accgtagacagcattgaaacttttgttgctgatatcaactctggacggtgggatgcaata
ttgcctcaagtgtctcaacttaagctgcctagaaataagttagaggatttatatgaacag
attgtattagaaatgattgagcttcgtgaattggatactgcccgtgctattctgaggcag
actcaagtgatgggcgtcatgaagcaggaacaacctgaaagatacttgcgacttgagcat
cttttagtcagaacgtactttgatccgaatgaggcttatcaagattcaacaaaagagaaa
cgacgagcacaaattgcccaagcccttgcagctgaagttactgtggtagcgccttctcgg
ttaatggctctaattggtcaggctctaaaatggcaacagcatcaagggctacttccaccg
ggaacgcaatttgacttatttcgtggaactgcggctatgaaacaagacgtggaggatgtt
tatccaacaacactttctcacacaataaagtttggtacaaaaagtcatgcagaatgtgct
cggttctcaccagatgggcagtttctcgtttcttgctctgtggatggattcattgaggtc
tgggactacattagtgggaaactcaagaaggatcttcagtaccaggctgatgaaactttt
atgatgcatgatgatccggtcctttgtgttgattttagcagagactcagagatgcttgct
tctgggtcacaagatgggaagatcaaagtatggcgtataaggactggccaatgcttgcga
cgtcttgaacgtgctcattctcagggtgttacaagtgttgttttttctcgtgatggaagc
cagttattgagtacatcttttgacaccacagcaagaatccatggcctaaaatctggaaag
ctattgaaggaattccgtggccactcatcatatgtgaatgatgcagtctttaccaatgat
ggagcacgtgtcatcactgcatctagtgattgcacggtcaaggtatgggatgtgaagaca
accgattgtctgcatacattcaagccaccacctccattaaggggaggtgatgcctcagtg
aattcggttcatattttccccaaaaatgcagatcatattattgtctgtaacaagacatcg
tcaatatacgtcatgacattgcaagggcaggttgtaaagagcttctcatctggtaaaaga
gaaggaggagactttgttgcagcttgcatatcaccaaaaggtgaatggatatactgcatt
ggtgaagacaggaatatgtattgcttcagtgtccagtctggtaagctggagcatctcatg
aaggttcatgagaaggacgtgattggtgtgagtcatcatcctcatagaaatctcgttgct
acttatagtgaagacagcacaatgaaactatggaagccttga

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