Momordica charantia (bitter melon): 111020268
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Entry
111020268 CDS
T05045
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03018
RNA degradation
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111020268
09123 Folding, sorting and degradation
03018 RNA degradation
111020268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111020268
03041 Spliceosome [BR:
mcha03041
]
111020268
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111020268
mRNA degradation factors
5'-3' decay
Lsm complex
111020268
Spliceosome [BR:
mcha03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111020268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
111020268
NCBI-ProteinID:
XP_022152570
UniProt:
A0A6J1DI46
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All DBs
Position
Unknown
AA seq
101 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLRDPDDPLKT
TDQTRRLGLIVCRGTAVMLVSPVDGTDEIANPFIQPDGASM
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggagaaaagaaactgttctggatttggctaagtttgtggacaaaggcgtccaa
gtgaagcttaccggtggcagacaagttacggggacgctgaaaggatatgatcaattgcta
aatcttgtgctggatgaagctatagagtttttaagagatcctgacgatccattgaagaca
acagaccaaactagacgtcttggcctaattgtttgcaggggaactgctgtaatgctcgtg
tctccagttgatggtacagacgagatcgctaacccctttatccaaccggacggtgcatcg
atgtaa
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