KEGG   Momordica charantia (bitter melon): 111020446
Entry
111020446         CDS       T05045                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03030  DNA replication
mcha03410  Base excision repair
mcha03420  Nucleotide excision repair
mcha03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111020446
   03410 Base excision repair
    111020446
   03420 Nucleotide excision repair
    111020446
   03430 Mismatch repair
    111020446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcha03032]
    111020446
   03036 Chromosome and associated proteins [BR:mcha03036]
    111020446
   03400 DNA repair and recombination proteins [BR:mcha03400]
    111020446
DNA replication proteins [BR:mcha03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    111020446
  DNA Replication Termination Factors
   ELG1-RFC complex
    111020446
Chromosome and associated proteins [BR:mcha03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    111020446
DNA repair and recombination proteins [BR:mcha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     111020446
  Check point factors
   HRAD17(Rad24)-RFC complex
    111020446
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 Mg_chelatase AAA_16 Rad17 Viral_helicase1 RuvB_N AAA_11 nSTAND3 DNAX_ATPase_lid RCF1-5-like_lid AAA_24 AAA_19 AAA_5 AAA_28 AAA_assoc_2 AAA_30 ABC_tran AAA_25 RNA_helicase bpMoxR MeaB NTPase_1 IstB_IS21 AAA_18 AAA_3 DO-GTPase1 KTI12 SLFN-g3_helicase T2SSE AAA_7 DNA_pol3_gamma3 NPHP3_N
Other DBs
NCBI-GeneID: 111020446
NCBI-ProteinID: XP_022152824
UniProt: A0A6J1DH57
LinkDB
Position
Unknown
AA seq 332 aa
MASSSSGNSSSYDMPWVEKFRPTKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
TTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL
MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLH
VKNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF
AHMRICDGVGSYLQLCGLLAKLSMVRETAKAP
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcgtcttcttcttctggcaacagcagcagctacgacatgccatgggtggagaagttc
agacccaccaaggtcgccgacattgtgggcaatgaagatgcagtttcaaggctccaagtt
atcgctcgtgatggcaacatgcccaatctcatattatctggtcccccaggaactgggaag
acaacgagtattctggctcttgcacacgagctcttgggaccaaattacaaagagggtgtt
ctggagcttaatgcatcagatgataggggaatagatgttgtgaggaacaaaatcaagatg
tttgcccaaaagaaagtaactttacctcctggtcgtcacaaagtggtaatattggatgaa
gctgacagcatgacaactggagcacaacaagccttgaggcgaacgatggaaatatactca
aacacaactcgttttgcccttgcatgtaatacctcttcaaaaattattgagcctattcag
agtagatgtgcgattgtccgattttcaagattaacagatcaagagattctcggtcgcctc
atggtggtgcttcaagcagaaaaggtaccctatgttccagaaggtctggaagcaatcatt
ttcactgctgatggtgatatgaggcaggcattgaataatttgcaagctacatacagcggg
ttccgctttgtaaaccaagacaatgttttcaaggtttgtgatcaacctcatccgctgcat
gtgaagaatgttgtgcgtaatgtgcttgaaggtaaattcgatgatgcttgtgcgggtttg
aagcaactctacgacttgggctattctccaactgacataataaccaccctcttccgtatc
attaagaactatgatatggccgaatatctgaaactggaattcatgaaggaaactgggttt
gcccatatgagaatatgtgatggagttggttcttaccttcagctatgcggtcttttggcc
aagctttcgatggttcgcgagacggctaaagcaccatga

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