KEGG   Momordica charantia (bitter melon): 111020554
Entry
111020554         CDS       T05045                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111020554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcha03041]
    111020554
Spliceosome [BR:mcha03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111020554
 Complex B
    111020554
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 RRM_1 zf-CCCH_2 zf-CCCH_4
Other DBs
NCBI-GeneID: 111020554
NCBI-ProteinID: XP_022152942
UniProt: A0A6J1DHM1
LinkDB
Position
Unknown
AA seq 292 aa
MASISGTQMGRANCPFYSKVGACRHGDQCSRLHPKPLISPTLLLSNMYQRLDTISPGVDA
RGNPIDPRKIQRHFEEFYEDIFEEMSKYGEIESLNVCDNLGDHMVGNVYVQYREEGQAAN
ALXNLRDRYYGGLLIRVDFSTVTDFIVAACRRYEENMCNFGPYCNFMHLKRISWYAYFLH
FPFYVLRSRLFRTRSHSXDRHRNYEQRSYGRHGHSRRYDDRDAYHESRSRRSRSTSPGRR
RSRSRSLRGRRNRSPVREGSGERRARFEQWNREGGQQANHNNANFDGSKSSH
NT seq 879 nt   +upstreamnt  +downstreamnt
atggcctccatttccgggacgcagatgggcagggctaactgtcccttctactccaaggtc
ggggcctgccgccatggcgatcagtgttcccggttgcaccccaagcctctcataagcccc
acactcttgctttctaatatgtaccagagacttgatacgattagccctggtgtcgacgcg
cgcggaaatccgatcgaccctcgtaagatccagcgccattttgaggagttctatgaagat
atattcgaggaaatgagcaagtacggtgagattgagagtttgaatgtctgtgacaacyta
ggtgaccacatggtgggtaatgtttatgttcaatatcgagaggaggggcaagccgcaaat
gctcttcrgaatcttagggacagatattatggtggacttctaattagagtcgacttctct
acagtgacagactttatagtagccgcttgtagacgatacgaagagaacatgtgtaatttt
ggtccctattgtaatttcatgcatctgaagaggataagttggtatgcatatttycttcac
tttcccttttatgtactgaggagcagactgtttaggaccaggagccacagccycgatagg
catcggaattatgaacaacgctcttatggtagacatggtcatagtcggaggtatgatgac
cgagatgcttatcatgaaagccggagcaggaggagtaggagtacaagcccaggtcgtaga
agaagcagaagtcgtagtctgcggggaaggaggaaccgaagtccagttagagaagggagc
ggagagaggcgagctagatttgagcagtggaacagggaaggaggacagcaagcaaatcat
aacaatgccaattttgatggaagtaaaagtagtcattaa

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