Momordica charantia (bitter melon): 111020593
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Entry
111020593 CDS
T05045
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03030
DNA replication
mcha03410
Base excision repair
mcha03420
Nucleotide excision repair
mcha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111020593
03410 Base excision repair
111020593
03420 Nucleotide excision repair
111020593
03430 Mismatch repair
111020593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcha03032
]
111020593
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111020593
DNA replication proteins [BR:
mcha03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111020593
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111020593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
RCF1-5-like_lid
PTCB-BRCT
AAA_19
AAA_30
AAA_22
RsgA_GTPase
BRCT_2
AAA_assoc_2
Sigma54_activ_2
nSTAND3
AAA_5
RuvB_N
Zeta_toxin
Gp44_lid
AAA_33
AAA_18
AAA_28
AAA_17
RNA_helicase
AAA_24
AAA_14
TsaE
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
111020593
NCBI-ProteinID:
XP_022152987
UniProt:
A0A6J1DHR4
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF
ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDNDDD
FVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLKPSGRGRGARG
SSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRASSD
TKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSLTW
TEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCGGP
GIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHFRT
NQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNYCL
ILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMPVI
KYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQENYI
NYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPASL
LHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVENL
TLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAPAV
KAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAESDD
EDALDNEGAEDSTNGEKLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSSSQA
SEKKGGGRGRGSGSATKRKR
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcggatattaggaaatggttcatgaaagcacacgacaaagacaatggcagtgcgttg
aagcatgcaaagcctgctgcaagcaattcagagaaagctgctacagccgaaccacagtcc
ggaaaaacagggctgagtggtggggaaagtactggcagaaggataactagtaagtacttt
gcctcagaaaagcagaagtccaaggacgcaaaagaaatagagggactcccgatcaaaaga
aagtctccacaggatgcgaaggaatcaccagccaaaagaaagtctcaaaaagatagtgag
gaatcaccgaaagctccaccttcaaaaaaattaaacaaaactgatgacaacgacgatgat
tttgttttgtctagttctagaaagaacttgtctgacgtcactcccaacaaaaagttgaag
agtggttctggaaagggaattactcagaaacctgtagagattgaagaaagtgatgacgag
gaagctaaaggtaccgagtcttctctgaagcctagtggaaggggtaggggggcaaggggt
tcatctgctgcaactgttagtggtagaggcagaggcggtggacggggtggatttatgaat
tttggggaaaggaaagatcctccacacaaaggagaaaaggaagtccctgaaggcgctcct
gactgtttagctggactaacttttgtaattagtggaacccttgacagtttggaacgagaa
gaagcagaagatttgattaaacgccatggtggacgcataactggatctatcagcaaaaaa
acaaattatctactatgtgatgaagatattgggggtcgaaaatcttccaaagctaaagag
ctgggaactgcttttctcactgaggatggcttatttgacatgatccgtgcatcatccgac
actaaagctcctccaagacaagaatctaaaaaatctgttgttaagtccttggaatctcca
acagagaaaaactcccaaaaagtaccagcagtacaagcaaagacgcgcaaagattttact
gctggtgcttcacctgctaagcaaaaaagtcgaacagttgaattttcttccctaacatgg
actgaaaaatataggccaaaggtttcaaacgacattataggaaaccagtcactggtcaaa
caacttcatgattggttggcacattggaacgagaacttttttgatgctcaaagcaaaaag
aagggtaaaaagctcaatgattccagtgctaaaaaagctgtcttattatgtggaggtcct
ggcataggtaaaactacgtcggctaagttggttagccagatgcttggatatcaggctata
gaggtaaatgccagtgacaatcggggtaaatcagatgcaaaaattcaaaagggaattagt
ggaagcaatgcgaattccataaaggagctcatcagcaatgaatctctgcatttcagaacg
aatcagccaaaacgtcccaaaactgtgttgattatggatgaggtagatggaatgtctgct
ggagataggggtggagttgctgatctgattgcgagtattaaaacctccaaaattccaatt
atctgcatctgtaatgaccgttacagccagaagctgaaaagccttgtgaactactgtctg
attctcagctttagaaagcctacaaaacaacagatggcaaaaagattcatgcaagttgca
aatgcagagggccttcaagttaatgagattgctcttgaggaacttgcggaaagagttaat
ggggatatgcgcatggcactaaatcagttgcagtacatgagtctgtcaatgccagttatt
aaatatgatgatattcgccaacgacttctgagcagtatgaaagatgaagacatctcacca
ttcactgccgttgataagctgtttggttttaattctgggaagttaaggatggacgaatgg
gtaaatctcagcatgagtgatcctgatctagtccctcttcttattcaggaaaattatatt
aattataggccaagttctgttagtaaggatgacaatgggatcaaacggatggatttgatt
gctcgtgcagctgaatctattgcagatggggatataatcaatgtacagattcgaaggcat
cggcagtggcaactctctcaaagtagttctattgcttcttgtataatcccagcttcatta
ctgcacgggcaaagagaaacacttgaacagggagagcgtaattttaatagatttagtgca
tggctgggaaaaaattcgacatttggaaaaaatatgaggcttttggaggatttgcatgtt
cacattcttgcttctcgtgaatcctgttcagggagacaacacctacgagttgagaacctt
actctatttctaaagaggttgactgagccactgcacactctgccgaaggatgaagctgtt
aaaatggttgtagaattaatgagtctatattcaattagtcaagaggattttgatactgtt
gtggagttgtcaaaatttcagggtcgtaagaatccgttggatggtgtagcccctgctgtc
aaagctgctctaacaaaggcatacaaagaagtaagcaagacacacatggtgcgggctgca
gatcttattacacttactggaattaaaaaggcccccaagaagcgaattgcagcaattcta
gaaccggctgaggatacaattgagggtgctggtggagacacattggccgaaagtgacgat
gaggacgctttggacaacgagggcgcggaagactccacaaacggtgagaagctgcaactg
gaacttcaaagcttgaataagaaaggaatgcaagtgcaattggatttgaagggcgtggat
aattcaagcgccaagaaatccggtggcagaggaaaaggtggccgtagtagttcgcaggct
tcagagaagaaaggaggggggcgagggcgaggttcgggatctgccaccaagaggaaaaga
taa
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