KEGG   Momordica charantia (bitter melon): 111020656
Entry
111020656         CDS       T05045                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03030  DNA replication
mcha03410  Base excision repair
mcha03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111020656
   03410 Base excision repair
    111020656
   03420 Nucleotide excision repair
    111020656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcha03032]
    111020656
   03400 DNA repair and recombination proteins [BR:mcha03400]
    111020656
Enzymes [BR:mcha01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     111020656
DNA replication proteins [BR:mcha03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    111020656
DNA repair and recombination proteins [BR:mcha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      111020656
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2 RNB
Other DBs
NCBI-GeneID: 111020656
NCBI-ProteinID: XP_022153061
UniProt: A0A6J1DJK0
LinkDB
Position
Unknown
AA seq 2209 aa
MSGESRRRGRGDNTRLKKQRIIRSAEEEIESKLGFDLFSEGDKRLGWLLTFAPSSWEDQD
TGKVFSCIDLYFVTQDGSSFKSKYKFRPYFYAATKDKMETDVEAYLRRRYEGQIADIEIL
EKEDLDLKNHLSGLCKAYLKLSFDTVQELMHVKSELLHVVESNWAKSDAAEAYDSILFGK
REQKPQDFLECIVDLREYDVPYHVRFAIDHDLRCGQWYDVSVSSTGVMLEKRKDLLQRAE
VHVCAFDIETTKLPLKFPDAEYDMIMMISYMIDGQGYLIINRECVGEDIENLEYTPKPEY
EGFFRVTNVKNELELLKLWFAHMREVKPGIYVTYNGDYFDWPFLESRAAYHGFKMSDEVG
FQCDKNQGECRSKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRS
AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV
QAYKANVVCPNKHQSDPEKFYSNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPSAYD
QLIYNLDRDLQYAIQVEGKMDLELVLNYNDVKNAIMEKLIRLRDEPVREEGPLIYHLDVA
AMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHLKK
QIESEFVDSGNVRLSKSFLELPKLEQQTKLKERLKKYCQKAYKRVLDKPVTEVREAGICM
RENSFYIDTVRSFRDRRYEYKGLNKVWKGRLSEAKASGNSIKIQEAQDMVVLYDSLQLAH
KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNACLLIEKIGKPLELDTDGIWCAL
PGSFPENFTFKTKDLKKLTISYPCVMLNVDVARNNTNDQYQTLIDPVRKIYKTHSECSIE
FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF
DKFLHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQK
SCAVTTARRLADFLGDAMVRDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKFYV
RKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVR
EKDDKFRQQKVADMFASLNRGKYSGKNSDDGCSKHVMNEENSEDLEDFQKKASSTNGPKP
VVRCYDVRGMKHPRDSEVDSVRQVNFNGGGCEPSSPLHVENVDKNVDYHGWLEMKKRKWK
DTLDKRKKQRLVNLRTSLPANDVTWELNAAMNNKETPRTSGVGSYFKRHEVSITRCHWQI
LQLVHSSQSGQFFAWAVVEGVMLKIPITVPRVFYLNSKVPITEEFVGRRITKTLPHGRRS
YNLYEVVTDEGQFRTLSNKLAALLADPEVEGIYESKVPLEFKSIFQIGCVCKVDKTAKKR
NIHDGWNLDELQMKTTTEFSYLEKPISFFYLYHSISEGRAIYITYFPSTRSMLVVVVSPY
PNKDLSSSFLERQFREACQMLSGQSQPPMSGITYKVDYVVNIKEAEVILQRSITDHRIIN
HGPIVAVIQCPNVQLLKSGVRALDDFPCVSIPSNARDSQYQVLGWQQIAAKIGMQRCAAS
SQWLNERISLARYAHVPLGNFELDWLIFTADIFFSRALHDQQQVLWISDDGVPDIGGINI
EDACFADEVQQPLLIYPGAYRKVSVELKIHHLAVNALLKSSQVNEMEGGGLFGFERDMQC
GAQLSNEEGGFDEAASCAPAFRVLKQLIQRCLADAVTSGNVYADAILRHLYRWICSPQSR
LHDPALHRLLHKVMQKVFALLLAELRKLGATIIFANFSRIIIDTGRFDLSAAKAYCDSLL
KTLQTRDLFEWIELEPLQFWHSLLFLDQFNFGGIPARDEEFTDIESQVDIVANWNIAEYL
PKKIQDHFVFIISQFLYIPWNYATKQAAARASLQHGDKCTPSVTVGAAESFESRVTEHLK
EQLSSYFSDKLLGIVRDIVLHMKGKDKNTQDVLPEQPSGSIHKGDAALEFIKHVCAVLAL
DQNVQHDVLVMRKNLLKYVRVREFAPEAEFSDPCPSLILPNVICSYCDDCQDLDLCRDSA
LQAPEWHCAVPQCGQPYNQEMMENALLQIVRQRERLYHVLDLVCVRCKQVKAAHLSEQCA
CAGSFKCKEDAKEFFSKMQIFLNVATRQKFQLLQEFTSWIIDDTSSISC
NT seq 6630 nt   +upstreamnt  +downstreamnt
atgagcggcgaaagccgaaggcgaggccgcggagacaacactaggttgaagaagcagagg
ataatccggtccgccgaggaggagatcgaatcaaagctaggatttgatctcttctctgaa
ggcgataagaggcttggatggttgctcactttcgctccttcatcttgggaggatcaggat
accggaaaggtctttagctgtattgatctttattttgtgacacaggatggcagcagcttc
aaatcaaaatataagtttcgtccttatttctatgctgccacaaaggataaaatggaaact
gatgtggaggcttatttgagacggcgttatgaaggtcaaatagctgatattgagatttta
gaaaaagaagaccttgatcttaagaatcatctgtcaggcctttgcaaggcatatttaaag
ctatcatttgacactgttcaagaattgatgcatgtaaagagtgaacttttgcatgttgtt
gaaagcaattgggcaaagtctgatgctgcggaagcatatgattctattttatttgggaaa
agggaacaaaagcctcaagattttctagaatgtattgttgaccttcgggagtatgatgtt
ccttaccatgttcgctttgctattgatcatgatttgcgctgtggacaatggtacgatgtt
agtgtatcaagcactggtgttatgcttgagaagagaaaagatcttctgcaacgtgctgaa
gttcacgtatgtgccttcgatattgagaccacaaagctaccattgaaatttccagatgct
gaatatgacatgataatgatgatttcctatatgattgatggacaagggtacctcattatc
aacagagagtgtgttggagaagatattgagaatttggagtacactccaaaaccagaatac
gaaggattcttcagagtgaccaatgtgaaaaatgagcttgagcttctcaaactgtggttt
gcccatatgcgggaggtgaaacctggtatctatgtcacctataatggtgattatttcgat
tggccattccttgaaagcagagctgcctatcatgggtttaaaatgagtgatgaagtggga
tttcaatgtgacaagaatcagggggaatgccgttcaaaatttgcttgccatttggattgc
tttgcgtgggtaaagcgtgatagctatcttcctcagggtagccagggtttgaaggctgtc
acaaaagcaaaattgggttatgatcctcttgaagtgaatcctgaggatatggtgcggtct
gcaaaggaaaagcctcagatgatggcttcctattctgtttcagatgctgttgctacgtac
tacttgtacatgacctatgttcaccctttcattttttctctagcaactataattccaatg
tcaccagatgaggtattgcggaagggaagtgggacactctgtgaaatgcttctaatggtt
caggcttacaaggccaatgttgtgtgtcctaacaaacatcaatcagatccagagaagttc
tatagcaatcggcttcttgaaagtgagacatatataggtggtcatgtagaatgcctagag
agtggtgtttttagatctgaccttcctaccagttttaggcttgatccatctgcttatgat
caattgatatacaacttggatagagatctgcagtatgccatacaagtagaaggaaagatg
gacttggagttggtgttaaactataatgacgtgaagaacgcaatcatggagaagcttatt
agattgcgggatgagcctgtacgtgaagagggccctctgatatatcaccttgacgtagct
gcaatgtatcctaacattattttgacaaataggcttcagccgccatcaatagttacagat
gaggtttgtactgcttgtgatttcaaccgtcctgggaaaacttgtctacggaaacttgaa
tgggtttggcgtggagaggtattcatggctaaaaaaagtgactattatcatttgaagaag
caaattgagtctgagtttgttgatagcggtaatgttcggttgtcaaaatcatttcttgaa
cttccgaagttggagcaacagacaaagctcaaagagcgtttaaagaaatactgtcaaaag
gcttataaacgggtacttgataagccagtcactgaagttcgagaagcagggatttgcatg
agagaaaactccttctatattgacactgtccgtagttttcgagatagaaggtatgagtac
aaagggctaaataaagtatggaaggggagactatcagaagctaaagcgagtggaaattca
atcaagatccaggaagcccaagacatggtggttctttacgattctttacaacttgctcat
aaatgtatcctcaactccttttatggatacgtgatgcgaaagggtgcccgatggtattca
atggaaatggccggggtagttacatatacaggagcaaaaatcattcagaatgcctgtctg
ctaattgagaaaattggaaaacctttggagttagacactgatggtatctggtgtgcacta
cctggatcattcccagagaacttcaccttcaaaacaaaagacttgaagaagttgacaatt
tcatatccatgtgttatgcttaatgttgatgtggctaggaacaacacaaatgaccaatac
cagacgcttatagatcctgtgaggaaaatatataaaacgcatagtgaatgctcaatagaa
tttgaagtcgatggaccatacaaggcaatgatccttcctgcttccaaggaagaaggcatt
ttgatcaagaagagatatgctgtcttcaatgatgatggaacccttgcggagctaaaaggc
tttgagatcaagcgtaggggggagttaaagctcatcaaagttttccaggctgaacttttt
gacaagtttcttcatggttccaccttagaagaatgctactcagtagtcgcatctgttgcc
aatcgttggcttgatcttctagataatcaaggaaaagatattgcagatagtgagttgctc
gattatatatctgaatccagtaccatgagtaagtccttggctgactatggggagcagaag
tcttgtgctgttaccactgcaagacgtcttgctgattttcttggtgatgcaatggtcagg
gataaaggtctacgttgtcaatatatagttgcatgtgaacctaagggaacacctgtaagc
gagcgtgctgttccagttgcaatctttgaaactgatgctgaaataatgaaattttatgta
cgcaaatggtgcaagatttcatcagaagttggcatccgatccatcattgactggtcatac
tacaagcaacgactaagctcagccattcaaaaaattataacaattccagctgccatgcaa
aaggttgcaaatcctgtccctagggtggttcatcctgattggttacataagaaagttcgt
gagaaggatgataaatttcgccaacagaaagtagctgatatgtttgcatccttaaacaga
ggtaaatattcaggaaagaacagtgatgatggttgcagcaaacatgtgatgaatgaagag
aactctgaagatttagaagacttccaaaagaaagcaagttctacaaatggtccaaaacca
gttgtgcgatgttatgatgtcagaggcatgaaacatccaagagatagtgaagtggactct
gtgaggcaggtgaattttaatggtggaggatgtgagccttcttcaccattgcatgttgaa
aacgttgacaaaaatgtagattaccatggatggcttgaaatgaagaagcgaaagtggaag
gatactttggacaagaggaagaagcaaagattggtaaatttaaggacttcgcttcctgct
aatgatgttacatgggagttaaatgctgctatgaataataaagagactcctagaacttct
ggtgttggttcatatttcaagaggcatgaagtatctataacacgctgccactggcagatc
ttacagcttgttcatagttcacagagtggccaattttttgcatgggctgttgttgaagga
gttatgctaaagattcctattactgttcctagagttttttaccttaattctaaagtaccc
attacagaagaatttgtgggtaggcgtattaccaaaactcttcctcatggaaggcgcagt
tataacctatatgaggttgtgactgatgaaggtcaatttaggacgctgagcaataaactt
gcagccctcctagcagatccagaagttgagggaatctatgaaagcaaggtgccactggag
ttcaagtccatcttccagattggttgtgtctgtaaagttgataaaactgctaaaaaacga
aacattcatgatggatggaatctggatgaactgcaaatgaagactacaactgaattcagt
tatctggaaaagccaatctctttcttctatctgtatcacagtatttctgaaggaagagcg
atctacattacttattttccctccacaagatcaatgctcgtggtggtggttagtccttat
ccaaacaaagacttgtcatcaagttttcttgaaaggcaattccgtgaagcttgtcaaatg
ctgtctggtcaatcacaacctcctatgagtggtattacttacaaggttgactatgttgtt
aacatcaaagaagctgaagtgattttgcaaagatcgataacagatcacaggatcataaac
cacggacctattgtagctgtaattcaatgcccaaatgtgcagctgctgaagtcaggtgtg
agagcgctagatgattttccatgcgtgagcattccttctaatgctcgtgatagccaatat
caggttcttggttggcaacaaatagctgcaaagattggaatgcaacgttgtgctgcatca
tcccaatggttgaatgagagaatctctcttgcaagatatgcccatgtaccattgggaaat
tttgaacttgattggctaatttttacagcagatattttcttttcaagggcattacacgat
cagcagcaggtactttggatatcggatgatggtgttccagatataggaggcattaatata
gaagatgcgtgttttgcggatgaggtccaacaacctttactgatataccctggagcatat
agaaaagtttctgtggagctgaagatccatcatttggctgtcaacgctctgctgaagagc
agccaagtgaatgaaatggaaggaggtggcttgtttggctttgaacgtgatatgcaatgt
ggggcacaactttctaatgaagaaggtggctttgatgaggctgcgtcatgtgctccagca
tttcgtgtcctgaaacaattgatacaaaggtgtcttgcagatgcagttacatctggaaat
gtatatgccgatgcaattttgcggcatctgtaccgatggatttgcagtccccaatcaaga
cttcatgacccagctcttcatcgcttgcttcacaaggttatgcaaaaggtgtttgctctt
ttgttggccgaactacgcaaattaggtgccaccattatatttgcgaacttctcaagaatt
attatagacacgggaaggtttgatctctctgctgctaaggcatactgtgatagcttgctg
aaaacactgcaaacaagggatctgtttgagtggattgagctggaaccattacagttttgg
cactcactgttgtttttggatcagttcaactttggtggaatcccagcaagagatgaggaa
ttcacagatattgaatctcaagttgatatagtggccaactggaacattgctgaatatctg
cccaagaagattcaggatcactttgtttttataatctctcaatttttatatattccatgg
aattatgcaaccaagcaagctgcagcaagagcatcgttgcagcacggtgacaaatgtacc
ccatccgttactgtgggagctgccgaatcatttgaatcacgcgtaacagaacatctcaaa
gagcagctaagctcttacttcagcgacaaactattggggattgttcgtgatattgttctt
catatgaaagggaaggacaagaacacccaggatgttttaccagaacaaccttctggtagt
atccacaaaggagatgctgcattggaatttattaagcacgtctgtgcagttttggcgctt
gatcaaaatgtccagcatgatgttctggtaatgaggaagaatttactcaagtatgtgcgt
gtcagagagtttgcaccagaagctgagttttctgatccctgtccctccttaatcttaccc
aacgttatttgcagctattgtgacgactgtcaagatttggacttgtgccgcgactcggct
ttacaagcaccggaatggcactgcgctgtgccacaatgcgggcaaccatacaaccaagaa
atgatggagaatgcactgcttcaaattgtgcggcagagggagcgactctatcacgtactg
gatctggtatgcgttcgctgcaagcaggtcaaagcggctcatttgtcggagcaatgtgct
tgtgctggctcattcaaatgcaaagaggacgcaaaagaatttttcagcaaaatgcagatt
ttcctcaacgttgccactcgtcaaaagtttcaactattacaagagttcacctcgtggatc
atagatgatacaagttccataagttgctaa

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