Momordica charantia (bitter melon): 111020708
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Entry
111020708 CDS
T05045
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03013
Nucleocytoplasmic transport
mcha03015
mRNA surveillance pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111020708
09122 Translation
03013 Nucleocytoplasmic transport
111020708
03015 mRNA surveillance pathway
111020708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111020708
03041 Spliceosome [BR:
mcha03041
]
111020708
03009 Ribosome biogenesis [BR:
mcha03009
]
111020708
03012 Translation factors [BR:
mcha03012
]
111020708
Enzymes [BR:
mcha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111020708
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111020708
mRNA cycle factors
Stress granule specific factors
111020708
Spliceosome [BR:
mcha03041
]
Complex C
Other components
EJC/TREX
111020708
Ribosome biogenesis [BR:
mcha03009
]
Eukaryotic type
90S particles
Helicases
111020708
Translation factors [BR:
mcha03012
]
Eukaryotic type
Initiation factors
eIF-4
111020708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
111020708
NCBI-ProteinID:
XP_022153139
UniProt:
A0A6J1DI60
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MAAAATTSVVPPNRRRSINAPEDKLEFETTEGVEPISSFDQMGIKDDLLRGIYAYGFEKP
SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQMVDTSSREVQALILSPTRELATQ
TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVQIVSGTPGRVCDMIKRRTLRTRAI
KLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV
KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN
FTVSHMHGDMPQRERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY
IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcagctacgacaagcgttgtgccgcctaatcgacggcgatcaattaatgcg
ccggaagataagttggaattcgagacgacggagggggttgagccgatctcgagtttcgat
cagatgggcattaaggacgatcttctccgtggaatatatgcatacgggttcgagaagccc
tcggccattcagcagagagccgtgagaccgattatcgaggggcgagatgtcattgctcag
gcccagtctggaacaggcaagacgtccatgattgcccttaccgtttgccaaatggttgat
acatcgagtagagaagtacaggccttgatcttgtcccctacgagagaattggcaactcag
acagagaaagtaatattggccattggcgactacattaatatacaagcacacgcttgcatt
ggcggcaaaagtgtaggtgaagatatcaggaagctcgagtttggagttcagattgtatca
ggaactcctggaagagtctgtgacatgatcaagagaaggacattgcgtaccagagccatt
aagttgttagttctggatgagtctgacgagatgttgagcagagggtttaaagaccagatt
tatgatgtgtatagatatctcccaccagaacttcaggttgtcttgatttctgctaccctt
cctcatgaaatcctggagatgacaaacaagttcatgacggatcctgtgagaatccttgtc
aagcgtgatgagttaactttggagggtattaagcaattcttcgttgcagttgaaagggaa
gagtggaagtttgataccttatgtgatctttatgacaccttgactatcactcaagctgta
attttctgtaacactaagcggaaggttgaatggttaactgagaagatgcgtagtaataac
ttcacagtttcacatatgcatggggacatgcctcagagggaaagagatgcaatcatgggg
gagttccgatcaggaactactcgtgtcctaatcaccactgatgtttgggcacgagggctt
gatgttcagcaggtatcactagtgataaactacgaccttccaaacaatcgagaactttac
attcacaggataggaagatctggtcggtttgggcgcaagggtgttgccattaactttgtg
aaaagcgatgacataaagatcctgagagatattgagcagtattacagtacccagattgat
gagatgcccatgaacgttgctgatttgatttaa
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integrated database retrieval system
