Momordica charantia (bitter melon): 111021074
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Entry
111021074 CDS
T05045
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36 isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111021074
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcha01002
]
111021074
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcha04121
]
111021074
03036 Chromosome and associated proteins [BR:
mcha03036
]
111021074
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111021074
Peptidases and inhibitors [BR:
mcha01002
]
Metallo peptidases
Family M67
111021074
Ubiquitin system [BR:
mcha04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
111021074
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
111021074
BRISC complex
111021074
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
111021074
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
111021074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
111021074
NCBI-ProteinID:
XP_022153607
UniProt:
A0A6J1DJE3
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MIDRTELLLQRRAFDPLLKPFETPATLTSKLEDPSESLTFCVHFLEREVSFRIELKEQNG
DQKMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSRNGNVTALIWGASPQTRS
DRRKDRVETHPEQLAAASAQAERMTAMTGKTTRVIGWYHSHPHITVLPSHVDVRTQGTYQ
LLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSL
SSSDNLSAKAGYGPGESPEQDTGDSMVASAIKGTGGSSELGYFFANADTNSQGKEKMGGS
YLTNNTNSGITDIDPMDLSESMQEAMHRSNIEMSAAEFSRKEIPLHVMPTASLIKLDSPL
MSFTDLQHVLFEEERSAYNQAILNIMRDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAIS
VLQDRVKENEIRLALLAEEAKNLEVEAANVIELAPGSSRQVSSPGPRASASATHRDLYPS
TASVSPRSVGSPMHRSRKGL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaccgtactgaattactgctccagagaagagccttcgatccgctgctcaagccc
ttcgaaactccggccactctcacttcaaagctcgaagatccttcggaatctctcactttc
tgcgtccattttcttgagagagaagtaagtttccgaattgaattgaaagaacaaaacggc
gatcagaagatgtctctgacgggcgtgaagatgtccgaagacgtctggtttacttgtctc
actcatgcattgtccacggagactgaggaaatcatggggcttctgctcggcgatattgag
cattcaagaaatggtaacgtaactgcattaatttggggagcatcgcctcagacacggtct
gacagaaggaaggaccgtgtggagactcaccctgaacaattggctgctgcatctgcccag
gctgagagaatgacagcaatgaccgggaaaacaactagagttattgggtggtaccattca
caccctcatattacagtgcttccttcccacgttgatgtgcgaactcaagggacatatcag
ctccttgattccgggtttattgggctgatattttcctgttttagtgaagatgcaaacaag
gttggaagaattcaagttattgctttccagtcctcagatgggaaacaaaatcacctctca
agacccatttctttatctcccgtgtatcgaaattcagtgattgatgttgaatcttctttg
agttcctctgataatttatcggcaaaagcaggctacggaccaggggagagtcctgaacaa
gacactggtgattcaatggttgctagtgctattaagggtactggaggatcttcagagttg
ggttatttctttgctaatgccgataccaactctcaaggaaaagagaaaatgggtggaagc
tatcttactaacaatacgaacagtgggattactgatattgatccaatggacttgtctgaa
agtatgcaagaagcaatgcaccgttcgaatatcgaaatgagtgctgccgagttctcaagg
aaagagattcctcttcatgttatgccgactgcatccctcatcaagctcgattcaccatta
atgtcttttacagatttacagcatgttctgtttgaagaggagagatcggcttataaccaa
gccatcttgaatattatgagagacggtaaagtgcatccgctaacgttcatacatcacacg
tcaacatatcaggcttcaatgtgcaagctaattgaatattgtctaagtccagccataagt
gtgctccaggaccgcgtaaaagagaacgaaatccggttagcattactggctgaggaagcc
aagaatctggaagttgaggctgcaaacgtgattgagctagccccgggatcatctcgccaa
gtttcaagtcctggacctcgagcaagtgcttcggcaacacacagggatttgtatccttca
accgcatctgtcagtccacgaagtgtaggaagtcctatgcaccggagtagaaaagggttg
tga
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