Momordica charantia (bitter melon): 111021208
Help
Entry
111021208 CDS
T05045
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111021208
03041 Spliceosome [BR:
mcha03041
]
111021208
03036 Chromosome and associated proteins [BR:
mcha03036
]
111021208
Enzymes [BR:
mcha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111021208
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111021208
mRNA cycle factors
Common to processing body (P body) and stress granule
111021208
Spliceosome [BR:
mcha03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111021208
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111021208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111021208
NCBI-ProteinID:
XP_022153767
UniProt:
A0A6J1DJU7
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MRTSWADLAASSAAENVAGGSSANNCSAGTTSAPGRSTYVPPHLRNRPASSDPPAAANSG
PAAGNDRSGNVGPRWGGGPRNDYNRSGYGGGSRGGGGGWGSRGGGWDRGRGDREVNPFGD
DDDTEQEFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVK
PTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQAMQRPARGARTVYPLA
LILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVD
LLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGXRQTMLFSATFPREI
QRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHEADKRSHLLDLLHAQRANGVQGKQSL
TLVFVETKKGADSLEHWLCLNGFPATTIHGDRTQQEREQALRSFRSGNTPILVATDVAAR
GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNSSIARSLADLMHES
NQEVPEWLLRFAARSSYTGGRNRRSGGGRFGSRDYRRDPSFNRGSSDYYTGGNSGGGYGG
GGGGGGGGGYGGGGGYGGSGVTSAWD
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttcgtgggcagatttggcagcaagctcggctgctgagaatgtagctggtggt
tcttctgctaacaattgtagtgctggaactacttcagcacctggccgatcgacctatgtt
ccaccgcatctgcggaatcgcccagcctcctccgatccacctgctgctgcaaatagtggg
cctgctgcgggaaatgatcgatctggaaatgtagggccccgctggggtggtggtcccagg
aatgattataatcgttctggttatggtggtggcagtcgtggaggtggaggtggatgggga
agtagaggtggtggatgggaccgtgggaggggggatcgtgaagtgaacccttttggggat
gatgacgatacagagcaagaatttggcgagcaagaaaataccggtataaactttgatgcc
tatgaagatattcctgtggaaacaagtggtgaaaatgtaccacctccagtgaatacattt
gctgaaattgatttgggtgaagcacttaatcataacattcgtcggtgtaagtatgtgaaa
ccaactcctgtccagcggcatgctattcctatatctcttgcagggcgagacttgatggct
tgtgcacagactggatctggaaagacggctgctttctgtttcccaattatcagtggcata
atgaagggccaggctatgcagagaccggcacgaggtgcacgcacagtgtacccacttgct
cttattctctccccgactagggagctttcaatgcaaatacatgaagaagcaaggaagttc
tcttatcaaacgggtgtgagagtggtggttgcttacgggggcgctccaatcaaccaacag
ctacgagatcttgaaagaggtgtggatattcttgttgcaactccgggaagattggtagat
ttgcttgaaagagcaaaagtttcactgcagatgataagatacttggctcttgatgaggca
gaccgtatgttagatatgggatttgagccgcaaattaggaaaatagtagaacaaatggac
atgcctccacctggtgytaggcagactatgctattcagtgcgacttttcctagggagatt
cagagactagcctctgattttctttcaagttatatatttctggctgttggaagagtgggt
tcaagtactgatctaattgctcaaagagttgagtttgttcatgaagctgacaaaagaagt
catttattggaccttctccatgcacaaagggcaaatggtgtgcaaggcaagcaatctcta
actttggtttttgtggagacaaagaagggagctgattctctggaacattggttatgtctt
aatggttttcctgccactactattcatggtgatagaacgcaacaggaaagagaacaagca
ttgagatcatttagaagtgggaacacgccaattttggtggccactgatgtagctgcccgt
gggcttgatattcctcatgttgcacatgtagtcaactttgatctccccaatgacattgat
gattatgttcatagaattggacgaacggggagagctgggaagactggtttagcaactgcc
ttttttaacgagaacaattcatcaatagcaaggtccttggctgatctgatgcatgaatct
aatcaagaagttcctgaatggctgttacgtttcgctgccaggtcctcatacactggaggg
aggaaccgtcgttctgggggaggcagatttggcagccgtgactatcgaagggacccctct
ttcaacagaggtagttctgattactatactggaggcaacagcggtgggggttacggcggg
ggtggtggtggtggtggaggaggaggatatggaggaggaggagggtacggtggttcaggg
gtgactagtgcatgggactaa
DBGET
integrated database retrieval system
