Momordica charantia (bitter melon): 111021334
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Entry
111021334 CDS
T05045
Name
(RefSeq) DNA helicase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111021334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcha03036
]
111021334
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
111021334
INO80 complex (yeast)
111021334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
PSY3
Motif
Other DBs
NCBI-GeneID:
111021334
NCBI-ProteinID:
XP_022153944
UniProt:
A0A6J1DKK6
LinkDB
All DBs
Position
Unknown
AA seq
1511 aa
AA seq
DB search
MDRNRQSKELFYSNLFNLEPLLNFQLPQPEDDFDYYANSSQDESRGSPGRTISKHSNGTM
TKRELSLARKRRWSLNSDEEDEGVDDYYGTHVSEERYRQMLGEHIKKYKRRSKDSSSPMP
TRMGNSVPKGNSSLKARKLGSEQQGGFLEVETANEWLNDVNPHRPGSHRDADFAPRRSPD
RVIYEPAYLDIGDGITYKIPPTYDKLAASLNLPSFSDIQVEEVYLEGTLDLGSLAAMIAG
DKRFGISSQAGMAEPQPQYESLQARLDALAASNSSQKFSLKVSDIGLNSSIPEGAAGSIK
RAILSEGGVLQIYYVKVLEKGDTYEIIERSLPKKEKVKKDPSVIEKEETEKIGKIWVNIV
RRDLPKHHRNFTAFHRKQLMDAKRFSETCQREVKMKVSRSLKLMRGAAIRTRKLARDMLL
FWKRIDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSNL
HPSEALPLGDENPDYEEGTWNSDSVPVEEEDPEEAELKKEALRVAQDAVSKQKMLTSAFD
DECSRLRLASEPEASQNEVAGANNIDLVHPSTMPVTSTVQTPELFKGSLKEYQLKGLQWL
VNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEDKNIWGPFLVVAPASVLNNWVDEINRF
CPDLKALPYWGGLSERTVLRKKINPKNLYRRDAGFHILITSYQLLVSDEKYFRRVKWQYM
VLDEAQAIKSSTSIRWKTLLSFNCRNRLLLTGTPVQNNMAELWALLHFIMPTLFDSHEQF
NEWFSKGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKKDVISELTRKTEITVHCKLSS
RQQAFYQAIKNKISLAELFDSNRHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSTYLY
FADIPNPLLPPPFGESEDVHYSGGHNLIEFKLPKLVHREVLQSSKPFAVAHGSFGGYFQK
YFDIFSSENVYQSTFMQGDNLHHSYWRSGTFGFTHLMDLSPAEVTFLANSSFLERLLFSI
IRWDRQFLDGIIDLIMESNDDPEYTSLELGKVRAVTRMLLMPSISQTNSLRRKLATGPGD
APFEALVIPQQDRLQSNVGLLHSAYTFIPRTRAPPIGTHCSDRNFAYQMVEQLHDPWVKR
LFIGFARTSNFNGPRKPIGPHPLIRELDSEIPVSQPALRLTYSIFGSSPPMQSFDPAKLL
TDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRR
DMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTK
DVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDILAPEDVVSLLLDDAQLEQK
LREIPVVAKDRQKKKQAKGIRVDAEGDASLEDLTNAEPRGTEYDPSPDLEKTKSSSKKRK
GPSDKKNPSKTRNLQKISETSAVVDFELDDMRKNLESQTQKPKRPKRPTKSVNENLVPAT
MGILEQTQYPQ
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtaacaggcaatccaaggaattgttctactccaatctcttcaacctcgagccg
ttgctgaactttcaacttccgcaaccggaggatgattttgattattatgcaaatagtagt
caggatgagagcagaggtagcccaggtagaacaatctcaaaacacagtaatggtaccatg
actaagagagagctgagtttggcaaggaaaagaaggtggtccctgaacagcgacgaggag
gacgagggtgtggacgattactacgggacgcacgttagtgaagagcggtatcgacaaatg
ctcggagaacacattaagaagtataagcgaaggtctaaagactcctcatctcccatgccc
acacgcatggggaattcagtgcccaagggcaactcaagtttaaaagctcggaagttgggg
agtgagcaacaaggaggatttcttgaagtggagactgctaatgaatggctcaatgatgtt
aatccccatagaccaggaagtcatcgtgatgcagattttgctccacggcgtagccctgac
agagtaatatatgagcctgcatatttggatattggggatggaatcacttacaaaattccc
ccaacttatgataagctggctgcttcactgaacttgccaagcttctctgacatccaagta
gaggaagtttacttagagggtacattggatttggggtccttagcagcgatgattgctggt
gacaagagatttggaatcagtagccaagcagggatggcagaacctcagccccagtatgag
tcacttcaggcaagattagatgccttggcagcttcaaactcgtcacagaagttcagtctc
aaagtatctgatattgggcttaattcatccattccagagggggctgctggaagtattaag
cgagctattttatccgagggtggcgtgctacaaatatactatgtgaaggttttggagaag
ggagacacttacgagatcattgaacgtagcctgcccaagaaagaaaaggtaaagaaagac
ccttcagttatagagaaagaggaaacagagaagattgggaaaatttgggtcaacattgtt
aggagagacttaccaaagcaccatcggaatttcacagcctttcatcgaaagcagttaatg
gatgctaagaggttctcagaaacttgccaaagggaggtaaaaatgaaggttagtagatct
cttaaattaatgaggggtgctgctattcggacaaggaaattagctagagacatgttgctc
ttttggaagcgaattgataaggagatggccgaagtgcggaaaagagaggaaagagaagct
gctgaagctttgaggcgagagcaggaacttcgagaagctaagagacaacagcagagactc
aattttcttatacaacagacagaactttatagtcattttatgcagaacaaatcaaatttg
catccttctgaggctctgcctttgggagatgaaaacccagattatgaagaagggacttgg
aattcagatagtgtgcctgttgaggaagaagatcctgaggaggctgaactgaagaaggag
gcacttagagttgctcaagatgcagtctcgaagcagaaaatgttaacaagtgcatttgat
gatgaatgctcaaggctacgcctagcttctgagcccgaggcttctcaaaatgaggttgct
ggagctaataacatagatctggttcatccctcaaccatgcctgtaacgtcaacagtacag
acacccgagttgttcaaaggcagccttaaagaatatcagctaaaaggtctccaatggttg
gtcaattgttatgagcagggtttaaatggcatacttgccgatgaaatgggccttggaaag
accatccaggcgatggcatttttggcccatttggctgaggataaaaatatatgggggcct
tttctagttgttgcacctgcatctgtcttgaacaactgggttgatgaaatcaatcgtttc
tgccctgacttgaaagctcttccatattggggcgggctttctgagcgtacagttctcagg
aaaaagatcaatcccaagaatttatatcgcagggatgctggttttcacatcctcattacc
agctatcagctgcttgtttcggatgagaagtattttcggcgtgttaagtggcaatatatg
gtattggatgaggctcaggcaatcaaaagttctacgagcataagatggaagacactgcta
agctttaattgtcggaaccgcttgctgcttactggaacacctgtccagaataatatggcc
gagttgtgggctcttttacatttcatcatgcctactttatttgacagtcacgaacagttc
aatgagtggttttcgaaaggaattgaaaatcatgcagagcatgggggtactttgaatgag
caccagcttaaccgtttgcattcaattttaaagccttttatgctacggagagtgaaaaag
gatgtaatctctgagcttacaagaaaaactgagattacagtgcattgcaagttaagttct
cggcagcaagctttttatcaagctatcaagaataagatatcacttgctgaattgtttgac
agcaatcgacatcttaatgagaagaaaattctcaatctcatgaacattgtcattcagctg
agaaaggtgtgcaatcacccagagttgtttgaaaggaacgagggaagcacatacctgtac
tttgcagacattccaaatcctcttttgcctccgccttttggggaatccgaggacgtacac
tactcaggaggtcacaacctcatagagtttaagttaccaaaactagttcatcgagaggtt
ctccaaagttcaaaaccatttgcagttgcacatggcagttttggaggatatttccagaaa
tattttgacatattttcttccgaaaatgtttatcaatccacattcatgcaaggagacaat
ttacatcattcttattggcgaagtggtacttttggtttcacccatttgatggatctgtcg
cctgcagaagttacatttttagccaatagttcttttctagaacggctacttttctccata
attagatgggacaggcaatttcttgatggaatcatagacctcattatggaatccaatgat
gatccagaatacacctctcttgagctgggaaaagtgcgtgcagttacaagaatgttattg
atgccttccatatctcagactaactcactgaggagaaagcttgcgacagggcctggtgat
gctccttttgaggctttagtcattcctcaacaggataggcttcagtccaatgttgggctt
cttcactcagcatacacgtttattccaagaactagagctcccccaataggtacccactgc
tcagatagaaacttcgcttaccaaatggttgaacaattgcatgacccctgggtgaagagg
ttatttattggttttgcacgaacatctaactttaatggaccaagaaagccaattggtcct
caccctttgattcgagagcttgattctgaaataccagtttctcagccagctcttcggttg
acatacagtatttttgggtcttctcccccaatgcaaagttttgacccagcaaagttgctc
acggactctgggaagctacaaacactagatatattactgaaacgcttacgggccgaaaat
catcgtgtacttctgtttgctcaaatgaccaaaatgttgaacattcttgaggattacatg
aactatcggaagtatagatatctcagacttgatggatcttccactataatggatcgtcga
gatatggtcagggacttccaacatcggagtgatatttttgtattcttgttgagcacaaga
gctggtggacttggcattaacttgacagctgctgatactgtcatcttttatgaaagtgat
tggaatccgacattggatttacaggccatggatagagctcaccgtctgggacaaacaaaa
gatgtcaccgtatacagactaatatgtaaagaaacagttgaagagaagattcttcaaaga
gctagtcagaaaaacactgttcagcagcttgtcatgaccggtggtcatgttcaaggagat
atcctagctcctgaggatgttgtatctttacttctggatgatgcccagttggagcaaaaa
ttacgagaaattcctgttgtggcaaaggatagacaaaagaaaaaacaagcaaagggtata
cgagttgatgctgagggtgatgcatcattggaggatttaacgaatgctgaaccccgggga
acagaatatgatccatctcctgatctagaaaaaactaaatccagcagtaaaaagagaaaa
ggaccctctgacaaaaaaaatccatcgaaaactcgaaatttacaaaagataagcgaaact
agtgcagtggttgactttgagttggacgacatgcggaaaaatcttgaatctcaaactcag
aaaccaaagagaccaaagagaccaaccaagagtgtaaatgaaaaccttgtaccagcaact
atggggattttggagcagactcaatatccacaatag
DBGET
integrated database retrieval system