Momordica charantia (bitter melon): 111021342
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Entry
111021342 CDS
T05045
Name
(RefSeq) putative CCR4-associated factor 1 homolog 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111021342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111021342
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111021342
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111021342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DDE_Tnp_1_5
Motif
Other DBs
NCBI-GeneID:
111021342
NCBI-ProteinID:
XP_022153955
UniProt:
A0A6J1DIB1
LinkDB
All DBs
Position
Unknown
AA seq
294 aa
AA seq
DB search
MEKTIRNSMPAPRSVRKKQEVWSHNLHEELELLNEYIPEFLVVTIDIGWYFGRKILRLSP
IQRLNILQLGLTLVDQKENVAMTLEFNFRDFDHISDMKGISLLDLFLKNNGFDFYKLKKD
GIVPENFTTLFLPICHSGRIERLITFHGFYEIAYLLKRLKIKFIPIFMATFAATAQHLLG
AISNLKHMARYCDGLLDGNLALKKFAKLLDVKRIGTAHFAGFDSLLTASIYTKMKQMFKL
PLEQCEGFLYSLPHRIKAFWSILKIINPSATTPPDKATISIMPKDSLIQGEPPQ
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggagaagacgattagaaattcaatgccagccccaagatctgtccgcaagaaacaagaa
gtttggtctcacaatcttcacgaagagttagagctgctgaatgagtatattccagagttt
ctagtagtcaccatcgatattggctggtatttcggaagaaaaattctacgattatctccg
attcaacgattaaacatactccaactcggtctcacactcgtcgatcagaaggaaaatgta
gcaatgactttagagtttaattttagagattttgatcacattagcgatatgaaaggcatt
tctttgctggatttgtttctaaagaacaacggatttgatttctacaaattgaagaaagac
ggaatagttccagagaatttcaccactctgtttctacccatttgtcatagtggtagaatc
gagagattgatcacctttcatggcttctatgaaattgcttatctcctcaaacggctcaaa
atcaaattcatacccatttttatggcaacgtttgccgccaccgctcaacatctattaggt
gctatcagcaatttgaagcatatggctcgctactgtgatggattgctcgacggcaaccta
gcattaaaaaaatttgccaagctactcgacgtgaagcgaataggtactgcacattttgcc
ggtttcgatagtttactcacagcttcaatatacaccaagatgaagcaaatgttcaagctt
ccactagagcagtgtgaagggtttctctacagcttgcctcatcggattaaggctttttgg
tcaatcctgaagatcatcaatccgtccgccacgactcctcctgataaagcaactatctca
attatgcctaaggactcccttattcaaggtgaacccccacaatga
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