KEGG   Momordica charantia (bitter melon): 111021594
Entry
111021594         CDS       T05045                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111021594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcha03019]
    111021594
Messenger RNA biogenesis [BR:mcha03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111021594
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     111021594
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 111021594
NCBI-ProteinID: XP_022154301
UniProt: A0A6J1DNB5
LinkDB
Position
Unknown
AA seq 128 aa
MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDL
YSDIPLGLYVIRGENVVLLGELDLEKEELPPHMTHVSAVEIKRAQKAEREASDLKGTIRK
RLEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaagcgcggaagatatctacctttcaacttctcttgctaattaccttgac
aagaaggttcttgtactacttcgagatggtcgaaagctattagggatactccgttcattt
gatcaatttgcaaatgccgttctggaaggatcctgtgaaagagtgattgtcggtgacctt
tacagtgatattcctttaggtctctatgtaattcgaggcgaaaacgttgtcttacttggc
gaactggacttggagaaggaggagctccctccacacatgactcatgtatcagctgtggag
attaaaagggctcaaaaagcagagagagaggctagtgatcttaaaggtacaattaggaaa
agattggagttccttgatctcgactga

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