Momordica charantia (bitter melon): 111021594
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Entry
111021594 CDS
T05045
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111021594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111021594
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111021594
mRNA degradation factors
5'-3' decay
Lsm complex
111021594
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
111021594
NCBI-ProteinID:
XP_022154301
UniProt:
A0A6J1DNB5
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDL
YSDIPLGLYVIRGENVVLLGELDLEKEELPPHMTHVSAVEIKRAQKAEREASDLKGTIRK
RLEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaagcgcggaagatatctacctttcaacttctcttgctaattaccttgac
aagaaggttcttgtactacttcgagatggtcgaaagctattagggatactccgttcattt
gatcaatttgcaaatgccgttctggaaggatcctgtgaaagagtgattgtcggtgacctt
tacagtgatattcctttaggtctctatgtaattcgaggcgaaaacgttgtcttacttggc
gaactggacttggagaaggaggagctccctccacacatgactcatgtatcagctgtggag
attaaaagggctcaaaaagcagagagagaggctagtgatcttaaaggtacaattaggaaa
agattggagttccttgatctcgactga
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