Momordica charantia (bitter melon): 111021617
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Entry
111021617 CDS
T05045
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03013
Nucleocytoplasmic transport
mcha03015
mRNA surveillance pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111021617
09122 Translation
03013 Nucleocytoplasmic transport
111021617
03015 mRNA surveillance pathway
111021617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111021617
03041 Spliceosome [BR:
mcha03041
]
111021617
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
111021617
Spliceosome [BR:
mcha03041
]
Common components
Common spliceosomal components
Cap binding complex
111021617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
DUF5798
Motif
Other DBs
NCBI-GeneID:
111021617
NCBI-ProteinID:
XP_022154329
UniProt:
A0A6J1DLR3
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MSSWKSLLLRIGDKSPEYGTSSDFKDHIETCFAAIRRELDHYGDEILPFLLQCVEQLPHK
IPLYGTLIGLMNLENEDFVKKIVEQTHTNFQDALNSGNCHRIRILLRFLTAMMSSKVLLS
TSLVVVFETLLSSAATTVDEEKGNPAWQARADFYITCILSCFPWGGAELIEQVPEELERV
MVGVEAYLSIRRHTFDTGLSFFEDDGEVEKTLNEKDFLEDLWGRIQVLSSDGWKVDSVPR
PHLLFEAQLVAGKSHEFGTISCPEQPDPPLTLSGITYGKQKFTAELTYPQRIRRLNIFPS
SKFEDLQPIDRFVMEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML
PQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS
NFQFIWPWDEWAYVLELPKWAPQRVFVQEVLNREVRLSYWDKIKQSIENAPGLEELLPPK
GGPNFKFSTDDDGEKSEQHVVSAELSNLVKGRAXAREVISWLDESVIPKHSLDVSLVVVV
QTLLDIGSKSFTHLITVLERYGQVILRMCNDQDKQVLLISEVGSYWKNNTQMTAIAIDRM
MGYRLISNLAIVRWIFSPENIQQFHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV
AAEEAVAKTQEELNAAESKLALVDGEPVLGENPVRLKRLKSYAEKAKEHEVSTRDNLEAK
EALLSRALEENETLFLSLYRNFSNTLTERLPAASSAQTLQDLKSVNAADANAMDLEEPSA
MEMDNEDARPEKSQLNGKTEHTYTIGENEQWCLTTLGYVKAFSRQYASEIWPHIEKLDAE
VLLSEEAHPLFRKAVYSGLRRSIDAI
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctggaagagtcttcttcttcgaattggcgacaagtccccggaatatggcacc
tcctccgacttcaaagatcatattgagacgtgctttgctgcgattcggcgggagctggat
cactatggagatgaaattttgcccttccttctgcaatgtgttgaacaattgcctcataag
attcctttgtacgggacactgattggattgatgaatttggaaaatgaagactttgtgaag
aaaattgtggagcaaactcatacaaattttcaggatgccttaaactctggaaattgccac
aggatccggattttgttacgctttcttactgcaatgatgagcagtaaagtcctgctatcc
acttctctagttgttgtttttgaaacattattatcttcagctgccacgacagtggatgaa
gagaagggaaaccccgcatggcaggcacgcgcggacttttacattacttgcattctatct
tgttttccttggggaggagctgaactgattgagcaagttcctgaagagctcgagagagtt
atggttggagtagaagcttacttaagtatccgaaggcacaccttcgacactggtttatcc
ttttttgaggatgatggtgaagttgagaaaactcttaatgagaaggattttttagaagat
ttatggggtcgtatacaagtgctatctagtgatggatggaaagtggatagtgttccaagg
cctcaccttctctttgaagctcagctagttgctggaaagtctcatgaatttggaaccatc
agctgtccagagcaacctgatccacctttaacactttctgggattacttatggcaaacag
aagtttactgcagagttaacttatcctcaaaggatacgacgactcaatatatttccgtca
agcaaatttgaggatctgcaacctattgatcgatttgtcatggaggagtatcttttagat
gtgcttctgttcttcaatggctgtcgaaaggaatgtgcatctttcatggttggcctacct
gtacctttccgatatgagtatcttatggcggagacaattttctcgcagttactcatgcta
ccacaacctccattcaagccaatttattatacactggttattatggacctttgcaaggct
cttcccggggcctttcctgcagttgtagctggtgcagttcgtgccctgtttgagaaaata
gctgatttagacatggagtgccggatacggctaatactttggttttcacaccatctatca
aactttcaatttatatggccttgggacgaatgggcttacgtactagaactcccaaaatgg
gccccacagcgagtttttgttcaggaggttctgaatagagaagtccgtctatcatactgg
gataaaataaagcagagcattgagaatgcgcctggtttagaagagttgctacctcctaag
ggtggaccaaatttcaaattttctacggatgatgacggagaaaaaagtgaacaacatgta
gtgtctgctgaattatccaatttggtgaaaggacgagctkcagcccgtgaagtaatttca
tggttggacgaaagtgtaattcctaagcatagtttagatgtttctctcgtggtggttgtg
caaactcttctagatattgggtcaaagagtttcactcatttgataacagtcttggagaga
tatggacaagttattttaagaatgtgcaatgatcaggacaagcaggtcttgcttatatct
gaagtgggttcttactggaagaataacactcaaatgacggcaatagcaattgatagaatg
atgggctacaggctaatatccaatttggccatcgttagatggatcttttctccagagaac
attcagcaatttcatacatcagatcgtccatgggagatcttaagaaatgcactgtgcaag
acatataatcgtatttcggatcttagaaaagaaatatcctccctcaagaaagatattgtg
gctgctgaagaagctgttgccaagacacaggaagaattgaatgctgctgaatcaaagctt
gcacttgtggatggcgaacctgttttgggagagaatcccgtgagactgaagcgattgaaa
tcgtatgctgaaaaagcaaaagagcatgaagtgtcaacacgcgacaatttagaagccaaa
gaagctcttctttcgcgagctcttgaggagaatgagacattatttctatcattgtacaga
aacttctccaatacattgaccgaacgccttccagctgcgtccagtgctcaaactctgcag
gatttgaagtctgttaatgctgctgatgcaaatgccatggatcttgaagaaccatcagcc
atggagatggacaatgaagatgcaagacctgaaaaaagtcaattgaatggtaagacagag
catacctacactattggtgaaaatgaacaatggtgcctaacaaccttgggatatgtcaag
gccttctcaaggcaatacgcttctgagatatggccacatattgagaagttggatgcagaa
gtcttattatcagaggaagcacacccacttttcaggaaagcggtctatagcggccttcgg
cgatctatagatgcgatctaa
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