Momordica charantia (bitter melon): 111021754
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Entry
111021754 CDS
T05045
Name
(RefSeq) uncharacterized protein LOC111021754 isoform X1
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111021754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111021754
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111021754
Enzymes [BR:
mcha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111021754
Messenger RNA biogenesis [BR:
mcha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
111021754
DNA repair and recombination proteins [BR:
mcha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
111021754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
RecQ_Zn_bind
HRDC
ResIII
Cas3-like_C_2
PTEN2_C2
NPP
Motif
Other DBs
NCBI-GeneID:
111021754
NCBI-ProteinID:
XP_022154482
UniProt:
A0A6J1DLT4
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
MEALLKSYFGFSAFRPYQKEVIQYILQGKDCLVVMATGSGKSLCYQVPPLVVGKTGIVVS
PLLSLMQDQVMALKQRGIKSEYLGSTQTDPTVQGKAERGEYNVLFMTPEKACSVPTSFWS
KLQKAGICLFAVDEAHCISEWGHDFRVEYKQLDKLRNVLSGLPFVALTATATEKVRFDII
NSLKMKGPQVTIGSFDRTNLFYGVKSFNRGALFLNELVLDISKYVASGGSTIIYCTTIKD
VEQIFKALEEARISAGIYHGQMDKKSRAESHRLFIRDELQVMVATIAFGMGIDKPNIRQV
IHYGCPKSLESYYQESGRCGRDGMASVCWLYYTRGDFAKGDFYCGESQTENQRRAVMESL
MAAQQYCSLATCRRNFLLNYFGEKSQSDKCGNCDNCIVSKKERDMSKEAFLLLACIQSCR
NKWGLNMPVDILRGSRAKKVLDAQFDKLPLHGLGREYSANWWKALASQLISHGYLTENIR
DVYRTISISAKGEQFLHSARHDSQPPLVLPVTSEMIGENGDDSTLSEAGKVENLATLKSG
LSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQTVKRIALTRPSTKARLANIDGVNQHL
LKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQGTTTRKLYTNSNQPRQLAPAKFEAWK
MWHEDGLSIQKISNFPGRSAPIKETTVSAYILDAVQEGYAIDWNKFCGEIGLTSRIFSDI
QAAVSKVGSAEKLKPIKDELPEEINYAHIKACLTMQSCGISPEGTLTSSHQESKTDEPLN
GMSKFSGSPTSKQQKEEPCDIEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHILAKA
TESSLVEWLKNNNDGVTVLNMMEHFKGTEEESLVALLNALEGDFVIYKINNVYKLM
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccttttgaagagttactttggattctcggctttcaggccgtatcagaaagaa
gtcattcagtacattcttcaagggaaggattgcttggtggtcatggccactggaagtggg
aagtccttatgttatcaggtaccgcctttggttgttgggaagactggcatagttgttagc
cctcttttatctttaatgcaagatcaggtaatggcattgaaacaaagaggcataaagtct
gagtaccttggaagtactcagactgaccccactgttcaaggcaaggcagagcgcggtgag
tataatgtgttgttcatgacaccagagaaggcatgctctgttcctaccagcttttggtca
aaattgcagaaggcaggaatttgtttgtttgctgttgatgaagcacactgcatttcagag
tgggggcatgattttagggtagaatacaaacagttggacaaactacgtaatgttctatca
ggtcttccatttgtcgccctgactgcaactgcaactgaaaaggttcgatttgacatcatt
aattctttgaagatgaaaggtccacaagttaccattggttcatttgatcggacaaatctt
ttttatggagtcaagtcttttaatcgtggtgcattattcttgaatgagcttgtgcttgat
atctcaaaatatgtggcctctggtggttcaactatcatttactgcactacaattaaagat
gtcgagcagatattcaaggcgcttgaagaagcaaggattagtgctggaatctatcatggt
caaatggacaagaaatcacgtgcagagtcccacagactatttataagggatgaacttcaa
gtcatggttgccactattgcttttggtatgggcattgacaaaccgaatataagacaagtg
atacattacggctgtccaaagagtctagaatcttattaccaggaaagtggacgatgtggt
agagatggtatggcttctgtttgctggctttattacacgagaggtgattttgctaaagga
gacttctactgtggtgaatcacaaactgaaaaccaaaggagagctgtaatggagtcattg
atggctgcacagcagtattgttcactagcgacttgcagaagaaacttcttgctcaattat
tttggggaaaaatctcagtctgataaatgtggaaattgtgataactgcatagtctcaaaa
aaggagcgtgacatgtcaaaagaagcatttcttctactggcctgcatccaatcatgcagg
aataagtggggactgaacatgcctgtggatattcttcgtgggtctcgtgctaaaaaggta
cttgatgctcagtttgacaagctcccacttcatggacttggaagagaatactcagcaaat
tggtggaaagcactagctagtcaactaatttctcatggctatttgacagagaacatacgt
gatgtttacagaaccattagtatcagtgcaaaaggagaacaatttctccattctgccaga
catgactcccaaccacctctagttttgccagtgacgagcgaaatgattggtgagaatgga
gatgacagcacattaagtgaagccgggaaagtggaaaatttggctactttgaagagtgga
ctttcagaggctgaggctaaactctatcaaatgcttttagaagagaggatgaagcttgcg
agaagagctggaactgctccatatgccatatgtggcgaccaaacagttaaacgaattgca
ttaactagaccatctaccaaggcaaggttagcaaatattgatggtgtgaaccagcaccta
ctaaagatgcatggagatcaaattcttcaagcagtgaatcatctatcacaacaagttggt
ctttcactggatggagaatgtaatgaagaaggaaatggacaaggtactacaacaaggaaa
ctctatacaaactccaaccaaccgcgacagttggccccggcaaagtttgaagcatggaaa
atgtggcatgaagatggtctatctatccagaaaatttctaacttccctggtagatcagcc
cctatcaaagagactactgtttctgcgtatattcttgatgcagtccaggaaggatatgca
attgactggaataaattctgtggtgagattggacttacaagtcggatattttctgatatt
caagctgctgtttcgaaagtcggatcggcagagaagttgaagcctataaaagatgaatta
ccagaggaaataaattacgcacacatcaaggcttgtcttacaatgcaaagctgtggaata
tcccctgagggcaccctaaccagcagccaccaggaaagtaaaaccgacgaaccactgaat
ggtatgtcgaagttttcagggagtccaacttcaaagcagcagaaagaagaaccttgtgat
atcgaaatgccatcaaataaaggaacaacatttattccttcaaccgaggaacttcccata
acattaaaacgtcagaaagtctgtgaagtgcaggaagaaagtcacattctagcaaaagca
accgagagctcgctagtagagtggctaaagaacaacaacgatggggttacagttttgaat
atgatggagcacttcaaaggaactgaagaagaatctctagttgctctactaaatgctctt
gaaggtgattttgtgatatataagataaacaatgtctacaagctcatgtaa
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