Momordica charantia (bitter melon): 111021895
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Entry
111021895 CDS
T05045
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03030
DNA replication
mcha03420
Nucleotide excision repair
mcha03430
Mismatch repair
mcha03440
Homologous recombination
mcha03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111021895
03420 Nucleotide excision repair
111021895
03430 Mismatch repair
111021895
03440 Homologous recombination
111021895
03460 Fanconi anemia pathway
111021895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcha03000
]
111021895
03032 DNA replication proteins [BR:
mcha03032
]
111021895
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111021895
Transcription factors [BR:
mcha03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111021895
DNA replication proteins [BR:
mcha03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111021895
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111021895
MMR (mismatch excision repair)
111021895
DSBR (double strand breaks repair)
HR (homologous recombination)
111021895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
111021895
NCBI-ProteinID:
XP_022154702
UniProt:
A0A6J1DMC5
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGKTQERYSLFISDAVSAEHAMLATQLND
IVKAGRIKKGSVIQLIDYVCSPVQGRKIIVVICLETIILDCEIIGNPKSSAQSDFSAQKA
TPSRNLEQSAKVGNGHVSDKNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP
IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
YEVIEVGKVYLISKGSLKPAQKNFNHLKNEWEVFLEASSSVELCPDEDDTIPRQQFSFRP
ISEIENAETNSILDIIGIVTSINPSIPVLRKNGMETQRRVLNLKDASGRSVELTLWGDFC
NREGQKLQEIINSGLSPILAVKSGKVSDFTGKSIGTISSTQLFIDPDLCESRILRDWYDG
GGKNTTSVSISKEIMPGAAKNEIRKTVSQIKDEGLGRSDKPDWITVKATISFIKTDSFCY
TACPLMIGDRQCNKKVNRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
SGEEILGVPAKELYVLKYEEQDDVKFGAIIRSKIFDQFLFRLKIKEEMYGDEQRVKNTVV
KADGVNYYLESKYMLNLLPDFSR
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcatctcacgccgaatgcaatctctgcaattgtcgcaggcgacgttaattcc
aagcctctggtgcaggtcctagatatcaagctcatcggtaaaacgcaggagaggtatagc
ctttttatctccgatgccgtttctgctgagcatgctatgctcgcaacacagcttaatgat
attgttaaggctggacgaatcaagaaaggatccgttatccagttgatcgattatgtttgc
agtcccgtccagggccgcaagattattgttgtgatttgcctggaaactattatattggac
tgtgagataattgggaatccaaaatcatcggctcagtcagatttttctgcgcaaaaggca
acgccatctagaaatttagagcaatctgccaaggttggtaatggccatgtgagtgacaaa
aatccagttcataatgtgcagagcttccaagctacagttcaacctccatatcagccacct
ccaaactataaaaaccacggtgcaatcattaagaatgaggcaccagcacgtataatccct
atagctgcattgaatccttatcagggacgatgggctataaaggcaagagttactgcaaag
ggtgatctccgtcgctacaataatgcccgaggagatggaaaagttttctcttttgacctc
cttgattctgatggaggagagatacgtgtgacctgcttcaacgcggttgttgatcgcttc
tacgaggtcatagaagttggtaaagtatacttgatttctaagggtagcctaaaacctgct
cagaagaacttcaatcacctaaagaatgaatgggaggttttcttggaggcatcttccagt
gtggaactttgcccagatgaagatgataccataccaagacagcagttttctttcagacct
atcagtgaaattgagaatgctgaaaccaattctattctggatattattggtattgtaaca
tctatcaacccatcaattcctgtgttgagaaaaaatggtatggaaactcaaagaagagtt
ctgaatttgaaggatgcatctggcaggagtgttgagctgacgctttggggggatttttgc
aacagagaaggtcaaaaactgcaagaaataattaactcggggctctctccaattttggct
gtgaaatctgggaaggtaagtgatttcaccgggaagtccattgggacaatttcttccact
cagcttttcatagatccagatctttgcgagtctcgcatcttgagggattggtacgatggt
ggcgggaagaacactacttctgtgtctatttctaaagaaataatgccaggagcagccaag
aatgagattcggaagactgtgtcccagattaaagatgaaggtcttgggagatctgataag
ccagattggattaccgtgaaagcaacaatatcgttcatcaaaacagattccttctgctac
acagcatgtccactaatgattggagatcgacagtgcaacaagaaggtgaacagatcagga
aactcaaagtggctatgtgacaggtgcaatcaagaatttgaggattgcgattacagatat
cttctccaagcccaaatccaagaccatactggattgacatgggtgacagccttccaggaa
tctggtgaagagattctgggtgtcccagccaaggagttgtacgtgttgaagtatgaagag
caggatgatgtcaagtttggtgcaataatcaggagtaaaattttcgaccaatttctgttc
aggctcaaaattaaagaggagatgtatggggatgaacagagggtgaaaaatactgtagtc
aaggcagatggggtaaactattatttggaaagcaaatatatgttgaatttgcttccagac
ttttcacggtaa
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