Momordica charantia (bitter melon): 111022025
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Entry
111022025 CDS
T05045
Name
(RefSeq) putative tRNA pseudouridine synthase isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcha03016
]
111022025
Enzymes [BR:
mcha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
111022025
Transfer RNA biogenesis [BR:
mcha03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111022025
Prokaryotic type
111022025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
111022025
NCBI-ProteinID:
XP_022154871
UniProt:
A0A6J1DQ07
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MAVSSLRFPLSPWTKTSSTCFRLPYIAFVSRSPHLRPRLLCCCSSPSASTDASSTRCAPD
QLRTWEAFRKKKVVMRIGYAGTDYRGLQMQREQQSHPTIEQELEAAIFKAGGIRDSNYGN
LYKISWARSSRTDKGVHSLATTISLKMEIPENAWMGDPCGILLANYINFYLPDNIKVFGI
VPSQRSFDPRRECDVRKYSYLLPAKLIGIESKFNTTEIDHHISEFKDILNSFQGEHPFHN
YTIRSKYRKTIRARQSPGYGHNSGEEVSPSGMSNSGFEESDSEDNFFVEGVKGPNQHAPR
LSVCCEDPVEVCSKLGNGSELQKGVRARWLHEPDEKDRIGASHFRKILCCSCGKLETSLG
YDFVEISIWGESFMLHQIRKMVGTAVAVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVL
RGNSFSNGKRPGAPKRPDLLTLNKSDDIIKSVDEFYRSAILPELTNFLDTEKAPWNEWVE
KLDKYTSIPNEQLDEVRNAWKAWKEKFESGQTHKRYIGHEEFKAPI
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctcttctctgcggttcccgctttccccatggacgaaaacttcatctacatgc
ttccgcttaccctacattgctttcgtttcgaggagcccacatcttagacctagactattg
tgctgttgctcatctccttctgcgtccactgacgcttcttccactcgctgcgctccggac
cagctccggacatgggaagcttttcgcaagaaaaaggtcgttatgcggatcggctatgcc
gggactgattatagaggactgcaaatgcaacgcgagcaacagtcacatccaacaatcgaa
caagaattggaagctgcaatatttaaggctggtggaattcgtgatagtaactatggaaat
ctgtacaaaatctcatgggctaggagcagtcgaactgataaaggagttcattccttggcc
acaacaatttccttaaaaatggaaatccctgaaaatgcatggatgggcgacccttgtggt
attttgcttgctaattacataaacttttatcttcctgataatatcaaggtttttggcatc
gtaccttcacagaggagctttgatcctcgaagggaatgtgatgtccggaagtactcttat
ctcctccctgctaagcttattggaattgagagtaaatttaacactactgaaattgatcac
cacatttcagagtttaaagatatattaaactcctttcagggagagcaccctttccataac
tatacaatacgttccaagtatagaaagacaattcgagccaggcaatctcctggatatggc
cataattcaggagaagaagtatcacctagtggtatgtcgaactctgggtttgaggagagt
gatagtgaagataatttttttgtcgaaggagtcaaggggccaaatcaacatgctccaaga
ttaagtgtttgttgtgaagatccagttgaagtatgcagtaagcttggaaatggatcagag
cttcaaaagggtgttcgtgcaagatggcttcatgagccagatgagaaagatcgcataggt
gcctcccacttcagaaagattctttgctgttcttgtgggaaacttgaaacatctcttgga
tacgatttcgttgagatctcaatctggggagaatctttcatgttgcatcaaatccggaaa
atggtgggaacagccgttgctgtgaagcggaaactgctcccaagagatattatagcattg
tcactgaccaagttttctagaatagttctgcccattgcaccagcagaggttttagtccta
agagggaacagcttttccaacggaaaacgtccaggagctccaaagaggcccgacttgctc
acattgaacaaatcggacgacatcatcaagtcggtggacgaattctacagatcagcgata
ttacctgagctaacaaacttcctggacacggaaaaagcgccatggaacgaatgggtggag
aaattggacaaatacacaagcattcccaatgagcaactggatgaagtcagaaatgcctgg
aaagcatggaaggaaaagtttgagagtggacaaacacataaaaggtacattggtcatgaa
gaattcaaagcacccatttga
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