Momordica charantia (bitter melon): 111022033
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Entry
111022033 CDS
T05045
Name
(RefSeq) E3 ubiquitin-protein ligase listerin isoform X1
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcha03009
]
111022033
04121 Ubiquitin system [BR:
mcha04121
]
111022033
Enzymes [BR:
mcha01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111022033
Ribosome biogenesis [BR:
mcha03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111022033
Ubiquitin system [BR:
mcha04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111022033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
zf-RING_2
zf-rbx1
FANCL_C
HEAT_GCN1
zf-ANAPC11
MMS19_N
zf-C3HC4
ParcG
zf-C3HC4_2
zf-RING_16
ATG5_HBR
SAM_Ribosomal_mS41
IBR_1
RINGv
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
111022033
NCBI-ProteinID:
XP_022154879
UniProt:
A0A6J1DNK4
LinkDB
All DBs
Position
Unknown
AA seq
1897 aa
AA seq
DB search
MGRPKGEGGRSKARPSSSSLAASLLPSDSAANAAGFGGFIGSYRLDSSLAGDDAAPFSDI
DSEVAQHLKRLSRKDPITKLKALASLSELLKQKSGKDVASIIPQWVFEYKKLLMDYNRDV
RRATHDTMTNLVIAAGRDIAPHLKSLMGPWWFSQFDSVSEVSQSAMQSLQAAFPAQEKRV
DALILCTTEIFMYLEENLKLTPGTLSDKAVAKDELEEMHQQVISSSLLALATLIDVLVAR
SERSETGKGSGETKHASKSRETAISFAEKLFTEHKYFIDLLNSKSPIIRSATYSVLRSLV
KNIPHAFKEQNMKTIAGSILGAFQEKDPSCHSSMWDTVLLFSKRLPNCWNYVNVQKTVLN
RFWNFLRNGCFGSQQISYPALILFLDTVPPSAVAGEKFLLEFFQNLWVGRNPFHSSNAER
LAFFQAFKECFLWGLRNASRFCNGDNSPQFQVTLVDVILVKLLWEDYLHVQCLKNQDMAL
SEDASLNNKRTAEISSTKYPMSYLQDLRKCIVEVLSGIHLVKQDLLSVFAMEFQKSCISM
FQLTENMEVASKTIEQIIGFILELEQLSMDKDDTWPLVLLVGPTLANTFPIIKSLDSSDG
VRLLSAAVSVFGPRKIIHELFIHNNGMSSTHFSGVEGQDLEARQFMQLFNEIFVPWCLQG
NNSSASARLDLLLALIDDEHLSEQWHSVISYSTNLDHPGNVLESMNSESLAMLAKLLDRA
RGKITHNDSRKVTNTWQKANLGNWHHEHLDSAAVAIAQSHAPLKSSFTDFLCAVLGGSVQ
SDCSSFVSRNGLTAILEAVFQKLASFLSQSPLIWARNSSSLLIARPGNSFLNSTSYSDAV
AMAHFALEVLDRCTFCLHNLGEENFLLPSILAALYAIDWDCSIEGRQDDMLDEKFMEERS
ARLLFGKCVHALRQKITDQFWKSCGTHNRKKYGSILIQFIRSAIFNEDTEEVVSLSCQWM
LEILDQISQDHSEEQYMLDQLLIKSDTWPVWIAPNFMAPNELAASTMKNIGLDIHKSGDH
KLISLVNMLMSKIGFEKLFSGEVENSSPCLDKSTNNEVISRAWLVAEILCTWKWPGGSAR
GSFLPLLCAYVKRSCSHESLLNSTFNMLLDGALLYGSRAARSIINIWPYPVSILEDIQEP
FLRALASLLFILLEENIWGRDKASSLFELLVSRLFIGEVVNIDCLRILPLIVSFLVRPMC
ERNFTLDFGSCSGDGSSKENLIQNTAEGWLQRVLSFPSLNEWQAGQDMEDWLLLVISCYP
FSSSMAGLTLKLDRNISTEESNLLLELFQKQRKISVKSPAVNHAPWVQMLLSELMVVSVG
YCWKQFNDEDWEFLLLQLMSWIQSAVVIMEEIAESVDDIIVKSSTSRNLDEILEKLEQSV
LISDPVPFCISRNALLSFSLFDGSFGLQGLKDMESLNPLQLDKLNHVNDRIVEGILRMFF
CTGISEAVACSCCDKAASIISSSRLELPYFWDLIASIVTKSSKDARERALKSIEFWGLSK
GPVSSLYGILFSPKPVPSLQYAAYVMLSTEPISYSAIIRENTPCYLDYDATTEQGSTQVD
FSSEYNVILKEEISCMIEKLPNNFFDMELIAQERVNIYLAWSLLLSHLWSLPPSSPSRER
LVQYIQNSASSGILDCLFQHIPVEGMALQKKKDTELPAGLSEASTAANQAITIGSLLFSV
EFLWLVEPVKLASFAGAIFGLMLRVLPAYVRGWFSDLRDRSKSSAIESFTKAWCSPSLIA
NELSQIKKAEFADENFSVVVSKSANEVIATYTKDETGMDLVIRLPSSYPLRHVDVDCMRS
LGISEVKQRKWLLSMMSFVRNQNGALAEAIRIWKRNFDKEFEGVEECPICYSVIHTVNHS
IPRLACKTCKHKFHSACLYKWFSTSHKSTCPLCQSPF
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggccgaagggagagggaggtagaagcaaggctagaccttcaagcagcagtttg
gcagcgtcacttctgccatcggattctgccgccaacgctgctggattcggcggctttatt
ggtagttaccggctggattcctctctcgccggggatgatgcagcacctttttcggatatt
gatagtgaagttgcacagcacttaaagaggctttcgaggaaggaccctattacgaagctc
aaagcattggcatctttgtcagagcttcttaagcagaagtctgggaaagacgttgcatca
attattccacaatgggtttttgaatacaagaaactattgatggattataatagggatgtc
cgacgtgctacacatgacacaatgaccaatcttgtaattgctgctgggagagatatagct
ccgcatctgaaatctttgatggggccatggtggttttctcagtttgattcagtttctgaa
gtctctcaaagtgcaatgcaatcattgcaggcagcatttcctgctcaggaaaagagagta
gatgctttaattttatgtacaactgagatatttatgtacctggaggaaaacttgaagctc
acaccaggtacattgtcggataaagcagttgccaaggatgaattggaagagatgcaccag
caggttatatcttcatcattgcttgcattggccacattaattgatgtgttggtagctcgg
tctgaaagatcagagactgggaaaggcagtggtgaaacaaagcatgcttccaagtctagg
gagaccgctatttcatttgctgaaaaattgttcactgagcataaatactttatagacctg
ttgaattccaaaagtcctattatccgatctgctacttattcagtcttaaggagccttgtc
aaaaatatccctcatgcttttaaggaacaaaacatgaaaactattgccggttctattcta
ggtgcttttcaggagaaagatccttcttgccattcatcaatgtgggatacagtgttactt
ttttctaaaagactgcccaactgttggaattatgtgaatgttcagaaaactgtactgaat
aggttttggaattttcttagaaatgggtgctttggatcccagcagatttcttacccagct
ttgattttatttttggacactgtcccacctagtgccgtagcaggggagaaatttcttctc
gaattttttcagaacttatgggttggaaggaacccattccattcctcaaatgcagaaagg
ctagcatttttccaggcttttaaagaatgttttctttgggggctacgtaatgcatcaagg
ttctgcaatggagacaattcgcctcaatttcaagtcaccctcgttgatgtcattcttgtt
aagcttttatgggaggattacttacatgttcaatgtctaaagaatcaagatatggccttg
tctgaagatgcatccttgaataacaagaggacagcagaaatatcaagtacaaagtatcca
atgagctacttacaagatttgagaaaatgcattgttgaagttctatctggcatccattta
gtgaaacaggatctactttcggtctttgctatggaatttcaaaagagttgtattagtatg
ttccagttgacagagaatatggaagtagcctcaaaaacaatagaacagataataggattt
atactagaattggagcaactttctatggacaaggatgatacctggcccttggttctcttg
gttggaccaacgctggctaatactttcccaatcataaaatcacttgactcttcagatggt
gtgagacttctatctgctgctgtttctgtttttggacctcgcaagattattcatgaacta
tttatacataataatgggatgtcctctactcatttttctggtgttgagggccaagatctg
gaagcaaggcaattcatgcaattatttaatgaaatttttgttccttggtgtttgcaagga
aataatagctctgctagtgctcgattagatctgttgcttgcactaattgatgatgaacat
ttgtccgagcaatggcattcggttatcagttactcaactaatctagaccatcctggaaat
gtgctcgagtccatgaactcagaaagtttagccatgttggcaaagcttttagacagagca
agaggaaaaattacacacaatgattcaagaaaggtcaccaatacctggcagaaggctaac
cttgggaactggcatcatgagcacttggactctgctgctgttgccatagcccaatcccat
gctcccttgaaaagttcatttacagattttttatgtgctgttttgggtggttctgtacag
agtgactgctcttcttttgtgtcaagaaatggattgaccgctatacttgaggcagtattt
cagaaattagctagtttcttatcgcagtctcctttaatttgggcaagaaattctagttct
ttattgatagctaggccaggaaattctttcctcaattccacaagttattcagatgctgtt
gcgatggcacattttgctttagaagtacttgaccgctgcaccttttgcttacacaaccta
ggtgaagaaaattttctacttcctagtattttagctgccttatatgctattgactgggat
tgtagtatagaaggaagacaagatgatatgcttgatgaaaaatttatggaagaaagaagt
gcaaggttgcttttcggtaaatgtgtgcatgccctacgtcaaaagataacagaccaattt
tggaagagctgtggtacacacaacagaaaaaagtatggaagtatcttgattcaatttatt
aggtctgccatcttcaatgaagatactgaagaagtcgtgtctttgagctgccagtggatg
cttgaaattctggatcaaatttctcaggatcattcagaggagcaatatatgttagaccag
cttttgatcaagagtgatacgtggcctgtctggattgctcccaacttcatggccccgaat
gaattggctgcttcaactatgaaaaacattggcttggatattcacaaatctggagatcac
aagcttatttctttggtaaacatgcttatgtcaaagattggatttgagaaacttttttct
ggtgaagttgaaaattcttctccttgccttgataagtcaacaaataatgaggtcatttca
cgagcttggctggttgctgaaatattatgcacatggaagtggccagggggtagtgctaga
ggctctttccttcctttactttgtgcttatgtcaagaggagttgttcacatgaaagcttg
ctgaattccaccttcaacatgttattggatggggctcttctctatggtagcagggctgca
cgaagcatcatcaatatttggccttatccagtttccatattagaggatattcaagaacca
ttcttgagagcccttgcatctcttcttttcattttgttagaagagaacatatgggggaga
gacaaagctagttcactgtttgagttgcttgttagtagacttttcattggtgaagtagtt
aatattgactgtttaagaattcttccactgattgtgagttttcttgttcgtccaatgtgt
gaaagaaacttcacacttgattttggttcatgctctggagatggctcttcgaaggaaaat
cttattcaaaatacagctgaggggtggcttcagagagtcctttcgttcccatcattaaat
gaatggcaggctgggcaagatatggaagattggctcttgttggtgatatcttgttatcct
tttagtagttccatggcaggcttaacgttgaagctggacaggaatataagcactgaggaa
agcaacctcttattggaattatttcaaaaacagagaaaaatatccgttaaatcacctgca
gttaaccatgcaccatgggtacaaatgttattgtcagagcttatggttgtttctgtcggt
tactgctggaagcagttcaatgatgaagattgggagtttctgttgctccagttaatgagt
tggatccaatcagctgttgtaataatggaggaaattgctgaaagcgtggatgatatcatt
gttaagagctcaacgtctaggaatttggatgaaatcttagaaaagcttgagcaaagtgtt
ttgatttcagacccagtccctttttgcatttctagaaatgcccttttatcattttctttg
tttgatggttcttttgggctacaaggcctgaaagatatggaaagtctaaaccccctgcaa
ttagataaattgaaccatgtcaatgatcgcattgttgaaggtattcttcgcatgtttttt
tgcactggaatttctgaggccgttgcatgctcctgctgtgataaggctgcatccattata
tcatcctcaagacttgaacttccttacttctgggacttgatagcttcaattgttactaaa
tcctcaaaagacgctagggagagagcattgaaatcaattgaattttggggactcagtaaa
ggacctgttagttctttgtatggcatccttttttcccccaaaccagttccttcgttgcag
tatgcagcctatgttatgctctcaaccgaaccaatttcttactctgcaataattagagaa
aatactccttgctatctggattatgatgccacaactgaacaaggctccacccaagttgat
ttttcatcagaatataacgtgattttgaaggaggaaatatcatgtatgattgagaaactc
cctaataatttttttgacatggagttgatcgcccaagaaagggtgaatatatatctcgct
tggtctttgttgttgtcgcacttatggtcactgccgccatcctcaccttcaagggaaaga
ttggtccaatatatccagaactcggctagctcagggatattagattgccttttccagcat
atacctgttgaaggtatggctcttcagaagaagaaagatacagagcttccagcagggcta
tcagaagcttcaactgcagcaaaccaagccattactataggttcattgttgttttctgtg
gaatttctttggctggttgaaccagtgaaactggcgtcttttgctggagcaatttttggc
ttgatgcttcgtgttcttcctgcttacgttcgagggtggttcagtgatctgcgtgaccgt
tcaaagtcttctgcaattgaatcctttacaaaagcatggtgcagtccttctctcattgca
aatgaattgtcccagataaagaaagctgaatttgctgatgaaaatttctcagttgttgta
agtaaatcagccaacgaggtaattgctacctatactaaagacgagacagggatggaccta
gtaattcgccttccttcatcatatccactgaggcatgttgacgttgattgtatgaggagc
ttgggaataagcgaagttaagcagcgtaaatggttattgtccatgatgtcgtttgtccgt
aaccagaatggtgctttagcagaagcaataagaatatggaagcgtaattttgacaaggag
tttgaaggagttgaagagtgtcccatttgttacagtgtcatccacacagtcaaccacagc
attcctcgcttggcttgcaagacctgcaagcacaagttccattcagcctgtctttataaa
tggttctccacttcacataaatcaacttgccctctgtgccagtctccattttaa
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integrated database retrieval system
