Momordica charantia (bitter melon): 111022136
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Entry
111022136 CDS
T05045
Name
(RefSeq) zinc finger CCCH domain-containing protein 40-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111022136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111022136
Spliceosome [BR:
mcha03041
]
Complex B
Other components
Prp19-related factors
111022136
Complex C
111022136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_3
zf-CCCH_4
zf-CCCH
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
111022136
NCBI-ProteinID:
XP_022154993
UniProt:
A0A6J1DLS8
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGR
DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE
EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR
HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVT
EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR
PQAPKLETEGSDEAKQAAVAHSGMLPRAVISQQQHSQLHPPGTHDQPQTMHYFNIPPPPP
QQERAFYPSMDPQRMGALVSTHDAGAPPNGPAGSTETGPGSEKQHQQGHQFPPYHAMHPP
PPPQYQQQFYPPYGYVQHYPPYPPYHSSMPPPPQHQPQPPPGNQQYQQHPASPGSAPQSH
GGASSGSAPLGSIPLVSAPSSTSSEPASS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatcggttgctgagggatctggaagctgatgggtgggaacgctctgatttcccc
atcatctgcgaatcttgcctcggcgataacccctacgttcgcatgacgagagctgattat
gataaagaatgcaaaatttgcacgcgcccctttacagttttcaggtggaggcctggacgt
gacgctagatataagaaaacagagatttgccagacatgtagtaagttaaaaaatgtatgt
caagtttgccttttggaccttgaatatggcttaccagttcaggttcgagatactgccctg
tctatcaactccaatgatgctattccgaagagtgatgtgaatagggaatattttgccgag
gagcatgatcggaaggctagagctggtatagattatgagtcctcatttggtaaggcacgg
ccaaatgacactattttgaagcttcaaagaactacaccgtattacaagaggaaccgtgca
catgtttgtagtttctatattaggggtgaatgcactagaggttctgaatgcccttacaga
catgagatgcctgaaactggagagttgtcccaacaaaatataaaggatcgatattatggg
gttaatgatccagttgcactgaagcttcttaacaaggctggagaaatgccttctctagaa
ccgccagaggatgagagtattagaaccttgtatgtgggcggtctagatgctcgagtcacc
gagcaagatcttcgggacaacttttacgctcatggtgaaattgaatccatcagaatggta
ctacagcgagcatgcgcatttgtaacctacaccaccagagaaggtgcagagaaggctgct
gaagagctttctaacaagctggtaataaagggcctcaggttgaaattgatgtggggtaga
ccgcaagcgccaaaactagagacagaaggttctgatgaagcgaagcaagcagcagtggct
cacagtggaatgttgccacgagcagttatctcacagcagcagcacagccagttacaccct
ccgggaactcatgatcaacctcaaactatgcactacttcaatattccaccaccaccacct
cagcaggagagagcattctacccatcaatggaccctcaaagaatgggagctctggtttcg
actcatgatgcaggggcaccccctaatggacctgcaggatcaaccgagactggacccggt
tcagagaaacaacaccaacagggacatcaatttcctccatatcatgcaatgcacccaccc
ccacctccacaatatcaacagcaattttatccgccatatgggtacgtacaacattatcca
ccatatcctccttatcattcgagcatgccacccccgccccagcaccagccccagccccct
ccaggcaaccagcaatatcagcagcatcctgcatcaccaggctctgcccctcagtcccat
ggaggagcatcttcaggttcagcaccactgggatcgattcctttagtgtctgctccatct
tcaacatcttccgaacctgcatcatcgtag
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