KEGG   Momordica charantia (bitter melon): 111022273
Entry
111022273         CDS       T05045                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03018  RNA degradation
mcha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111022273
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111022273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcha03019]
    111022273
   03041 Spliceosome [BR:mcha03041]
    111022273
Messenger RNA biogenesis [BR:mcha03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111022273
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     111022273
Spliceosome [BR:mcha03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    111022273
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 111022273
NCBI-ProteinID: XP_022155134
UniProt: A0A6J1DPC5
LinkDB
Position
Unknown
AA seq 98 aa
MASGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISIVGELDEELDSNLDLSKLRAHPLKPVIH
NT seq 297 nt   +upstreamnt  +downstreamnt
atggcgagtggacctgggcttgaatctctggttgatcaaacaatatcggttatcacaaat
gacggccgcaatatagtgggggtgttgaaaggatttgaccaggctacaaatattatcctt
gatgaatctcatgagcgtgtttactcaaccaaggaaggcgttcagcaacttgtattgggt
ctatatataatccgaggcgacaatataagcattgttggggagctagatgaggaacttgat
tctaatctcgacttgtcaaaattgcgagctcatcctctgaagcctgtgattcattaa

DBGET integrated database retrieval system