Momordica charantia (bitter melon): 111022691
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Entry
111022691 CDS
T05045
Name
(RefSeq) protein CHROMATIN REMODELING 8-like isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
111022691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcha03036
]
111022691
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111022691
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
111022691
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
111022691
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
HDA2-3
ResIII
WHD_SOWAH
NB-ARC
Motif
Other DBs
NCBI-GeneID:
111022691
NCBI-ProteinID:
XP_022155594
UniProt:
A0A6J1DQQ9
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MEEDEDQILLNNLGVTSENPEDIERNLLEEANKNSENGAEVGGIAEENACDKLDSIDSSS
ASHVQLYHKLRAVEYEIDAVASTVEPVKKLERNEKHTYVGTVSQEHGLEEDYVSASTDQL
QRALAVDRLRSLEKTRQQLKIDFSHSCRVKDAKTILEIVKDKPKLKRKSKEVKKSGNSVE
KRLKVVSFDEDNNFDAALDAATVGFVETERDELVRKGILTPFHKLKGFERCLQNPGQSRH
EVKEEKEENDDFASVSVDRALRSMSEAAQARPTTKLLDPEALPKLDPPTHPFYRLKKPAK
VPLSAEDKVTKKIKCKKTKRPLPDKKYRRRIAMEERDEEVAENMSDGLSTSSFEREDSGD
LEDEVTEPSFVTLEGGLKIPHSIFDQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTV
QVLAFLGALHFSSIYKPSIIVCPVTLVRQWKREARKWYPGFLVEILHDSAHDSTFRKMHE
NSHGSDESEDSEDTDYRRNLQPKGTKKWDSLIDRVLSSESGMLITTYEQLRLVGEKLLDI
EWGYAILDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGSPIQNKLTELWSLFDFVFPGKLG
VLPVFEAEFAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLPKKT
EHVLFCSLTSEQRSVYRAFLASSEVEQILDGNRNSLSGIDVMRKICNHPDLLERDHSFQN
PDYGNPERSGKMKVVEQVLKVWKEQDHRVLLFAQTQQILDILEKFLIGGGYTYRRMDGGT
PVKHRMALIDEFNNSNEVFIFILTTKVGGLGTNLTGADRVIIFDPDWNPSTDMQARERAW
RIGQQRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFTLYE
DGEDRSTETSNIFSQLTDSVNVVGVQKNENDEQKSCSGLVSYADSADNKPCKPEVETSGR
NGSVETGQGGGTDEDTNILKSLFDAHGLHSAVNHDVIVNADGGEKIRLEEHASQVARRAA
EALRQSRMLRSNESISVPTWTGKAGTAGAPSSMRWKFGSTTNTQVTSNSKSSDEVSRNGA
SHLNGYAAGASSGKALSSAELLAKIRGNQERAISAGLEHQVQPSTSSTRNNVRGAGVGSS
RSSKNLSGSQPEVLIRQICTFIQQRGGATDSATIVQHFKDRIPSNDLPLFKNLLKEIAIL
EKSPCGSFWVLKPEYKQ
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacgaggatcaaattttgctgaacaacttgggtgtgacgtctgaaaatccg
gaggatatagagcggaacttgttggaggaggccaataagaacagtgagaatggggctgaa
gttggagggattgcagaagagaacgcctgtgataagttagatagcattgattcatcttct
gccagtcatgtgcagctctatcataagctgagggccgtagaatatgagatagatgctgtt
gcatcaacagtggaaccagtgaagaaacttgaaagaaatgaaaaacatacttacgttggc
actgtttctcaggagcatgggcttgaggaggactatgtttcagcttctactgatcaactt
cagcgtgccctagcagttgacaggctaagaagcctggagaaaacccgacagcagttgaag
atagatttttcccattcgtgcagagtcaaggatgctaagacaatattggagatagtaaaa
gacaaaccaaaacttaaaagaaagtctaaagaggttaagaaatcaggaaacagcgtagaa
aagaggttgaaagttgtgtcatttgatgaggataacaattttgatgcagctttggatgca
gccaccgtgggctttgttgaaacagaaagagatgaattggtacggaaaggaattttaaca
ccatttcacaagctgaagggctttgaacgctgtcttcagaacccaggtcaatcaaggcat
gaagtaaaggaggaaaaagaggaaaacgatgacttcgcttccgtcagtgttgatagagct
ctccggtccatgtcagaggccgcacaagctcggccaaccactaaactgcttgatccagaa
gctttgccaaagctcgatccaccaactcatcctttctacaggttaaaaaaacctgcaaag
gttcctctatctgcagaagacaaagtcacgaagaaaataaaatgcaaaaagactaaacgg
cctttaccagacaaaaaatatagaagaagaattgcaatggaggaaagagatgaggaagta
gctgagaatatgtcagatggtttgtctacatcaagttttgaaagagaagattcaggagac
ttagaagatgaagttaccgaaccttcttttgtgacgcttgaaggtgggctgaaaattcct
cacagcatatttgatcagctctttgattaccaaaaagttggggtgcagtggttatgggaa
ttgcactgccaaagggcaggtggaattatcggagatgagatgggccttgggaagacagtc
caggttttggcttttttaggtgcattacatttcagtagtatttataaaccaagcatcatt
gtctgccctgttacactagttaggcagtggaagagggaggcaaggaaatggtacccaggc
tttctggtggaaatcctacatgattctgctcatgattctacttttaggaaaatgcatgaa
aactctcatggaagtgatgaaagtgaagattctgaggacaccgattataggagaaacttg
caacccaaaggcacaaaaaaatgggattccttgatcgaccgtgttttgagctcagaatcc
ggtatgcttattaccacttacgaacaactacgactggtaggggagaagttgcttgacatt
gaatggggttatgcaatcytggacgaaggacatcgtattcggaatccaaatgctgaagta
actttagtttgcaagcagctacaaacagtacaccgcataataatgactggttctccaatt
cagaacaaattgaccgagctgtggtctttgtttgattttgttttccctgggaagttgggg
gtattgcccgtatttgaggcagagtttgcagttcctatatctgttggtggctatgctaat
gcttccccgttgcaagtatcaactgcatataggtgtgctgtcgttcttcgtgacttaatc
atgccttatctgctcaggaggatgaaagctgatgtgaatgctcatttgccaaagaagact
gaacatgttctcttctgcagccttacttccgagcaacgttctgtttatagagcgttcctt
gcgagctctgaagtggaacaaattttggatgggaatagaaattctctttctggaattgat
gtaatgcgtaaaatttgcaaccacccagatctgctcgagagggatcactctttccaaaat
cctgactatggtaatcctgaacgcagtggaaaaatgaaagtggttgagcaagtgctgaag
gtatggaaggagcaagatcatcgtgttcttctttttgcgcaaacacaacagatactcgac
attttagagaaatttctgataggaggtggttatacttataggaggatggatggtggtact
cctgtcaaacacagaatggctttgattgatgaatttaataattccaatgaggtgtttatt
tttattttaacaaccaaggttggtggtctgggaacaaacttaactggagcagatagggtg
ataatatttgaccctgattggaatccgtcaaccgacatgcaggcccgggagcgtgcttgg
cgtattggtcaacagcgggatgtaactgtgtacagattgataactcgtggaactatagag
gagaaggtgtaccatcgacagatatataaacattttctcacgaataagatattaaagaac
ccacagcagaaaaggttctttaaagctagagacatgaaggatctctttacactgtatgag
gatggggaagacagatcaacagaaacatcaaacattttcagtcagttgactgatagtgta
aatgttgttggtgttcagaaaaatgagaatgatgaacaaaaatcttgtagtggcttagta
tcatatgcagattctgctgataacaaaccatgcaaaccagaagttgaaacttctgggagg
aacggttctgtagagactggtcagggtggtggaacagacgaagacacgaatatcttgaag
agcctttttgatgcrcacggcttacatagcgctgtgaatcatgatgtcatcgtcaatgct
gatgggggggagaagatacggcttgaggagcatgcttctcaagttgcacgtagagcagcc
gaggcattacgccagtctagaatgctgcgaagtaatgagagtatctccgttccaacgtgg
accggaaaagctggaactgctggtgcaccatcatccatgcgttggaagttcggttcaact
acgaacacacaggtaaccagtaattctaaatcctcagatgaagtatctagaaatggagct
agtcatttaaatgggtatgcagctggggcatcttctggaaaggccttatcttcagcagag
ctgttggctaaaatccgaggaaaccaagaaagagcaatcagtgctgggcttgaacatcaa
gttcaaccatctacttcaagtactcgaaacaatgtaagaggtgctggtgttgggtcttct
cggtcatctaagaacttatctggatcacaacccgaagtattgattcgtcagatatgtact
tttattcagcaaagaggtggagccactgattcagccacaattgtacagcattttaaggac
aggataccctcgaatgatttgcccctgttcaagaatctgctgaaagagatagcaatatta
gagaaaagcccctgtggttcattctgggttctgaagccagagtataaacagtaa
DBGET
integrated database retrieval system
