Momordica charantia (bitter melon): 111022753
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Entry
111022753 CDS
T05045
Name
(RefSeq) exosome complex component RRP4 homolog isoform X1
KO
K03679
exosome complex component RRP4
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111022753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111022753
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111022753
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
111022753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
111022753
NCBI-ProteinID:
XP_022155677
UniProt:
A0A6J1DQ00
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MFGLAIVTDLEVDMRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYE
DGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVMEVAPKRW
RLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQ
ARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPAEDMM
IEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVI
METVNLSLSLNIDVHEMLGSEFCVLVAENEVERRTSSKKRG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtttggcaatagtgaccgatttagaagttgatatgagaggattacagatttct
ttgaatcaaactcagaaaattcggctccagagtgccttagaatcacttgagtcgatctct
ttgaaggccaattctgatgcttctgttatagttgctgatactatccctgtcaattatgag
gatggcatcctcaagggacacgggacttttgacctgcatggtgaagtggttgccactgtt
tgtggagtggttgagcgagtcaataagctcatctatgtacgtgcattacgtgccagatat
aaaccagaggttggtgatattgtggtagggcgtgttatggaggttgctccaaaacgttgg
agattggatataaattatagtcaagctgcagttttgatgctttcttcaatgaacttgcct
gatggtattcagaggcggcgaactgcagtagatgaactcaacatgcggagtatttttgaa
gaaaatgatgttatttgtgcagaagttcgtggttttcagcatgatggtctacaccttcaa
gcaagaagccagaaatatggaaagcttgagagaggccagctgctcacagtatcaccatat
ctagtgaagagacgcaagcaacacttccatcatttagagcagtacggaattgacttaata
cttggatgcaatgggtttatctggattggggagcatgttgatcccgccgaggatatgatg
atagaagatcaagttaataaatttgaacaaaagggtccaaagtcagaaggaaattttggt
aaccttgaagagcaggaaagagtatataccccattagagacacggcggaatatatgcagg
gctgcaaatgccgttcgggtactgtctaccttaggtttcatagttacagtagaagttatt
atggagacagttaatttaagtctttctctgaacatcgatgtgcatgaaatgcttggttca
gagttctgcgttctcgttgcagaaaatgaggttgaacggaggacctcaagtaagaagagg
ggatga
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