Momordica charantia (bitter melon): 111022901
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Entry
111022901 CDS
T05045
Name
(RefSeq) general negative regulator of transcription subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111022901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111022901
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111022901
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111022901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Dehydratase_MU
Motif
Other DBs
NCBI-GeneID:
111022901
NCBI-ProteinID:
XP_022155899
UniProt:
A0A6J1DRP6
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELESQIDNFEAEIEGLSVKKGKSRPPRLIHLETSITRHKA
HIMKLELILRLLDNDELSPEQVNDVKEFLEDYVERNQEDFDEFSDVDELYSTLPLDKVES
LEDLVTICPPSLVKGTPVLNLKTTLAPSTTQVPVAAAANHQQNTVIQDQVDDSTLPDGNS
DTVLKTPPPKNSVLGSSAATTPTGNHAASGSLNGAVLGSGLSAPLAILPGSSTVRAVLET
TGAPNSSPVNLPTSAKDEETSFPGRKLSPSFSDSGLVRGGMGRGVIANQPPSSSSHTSGI
VVPSTITLGNVPSASEVTKRNFLGAEERAGNSGITQSMVSPLSNRMVLPSAAKVSDATST
VDPGNVSDAAAIGGRVFSQSVVPSMQWRPGSSFQNPNEGGQFRGRAEIAPDQREKFLQRL
QQVQQQGHGTLLGMTLGGGNHKQFSSQQQSSLLQQFNSQNSSVSSQAGLGIGVQAPGVNA
VTTGSLQQQQNSFQQSNQQALMTSGAKDSDVAHAKAEDEQQQQQQQSIPEDTSDPAAGSV
LGKNLMSDDDLKGSYPIDAPVGVPVSLTETASVSREDDLSPGQPLQPGQPSGSLGVIGRR
SVSDLGAIGDNLGGPSMTTGGIHDQLYNLQMLEAAYYKLPQPKDSERPRSYTPRHPAITP
PSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAARELKKQSWRYHRK
YQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgagtcgaaagctgcagggtgagattgatcgtgttcttaagaaggtccaagaa
ggggttgacgtctttgacagcatttggaacaaggtttatgataccgacaattccaatcag
aaggagaagtttgaggccgacttgaagaaggagataaagaagcttcagagatacagggac
caaatcaagacctggattcagtcaagtgagatcaaggataagaaggtcagtgcctcttat
gagcaggctttggttgatgctcgtaaacttattgagcgtgaaatggaaagattcaagatt
tgtgaaaaggagacaaaaactaaagccttctcgaaagaaggattgggtcaacaacctaaa
actgatccaaaggagaaggctaaatcagagacacgggattggttgaacaatgtggttggt
gagttggaatctcagattgataattttgaagctgagattgagggtctctctgtgaagaag
gggaaatcacggccacctagattgattcatcttgaaacatctattacacggcacaaggct
catataatgaagctggaattgatcttgagactgcttgataacgatgaattgagtcctgag
caagtcaatgatgtcaaggagttcttagaagactacgtggaaaggaatcaggaggatttt
gatgaattcagtgatgtggatgagctttacagcacactaccactcgacaaggtggaatcc
cttgaagatctggttacaatttgccctcctagccttgtgaagggcacaccggttctcaac
ttgaagactactttggcaccatcaacaactcaagtgcctgttgctgctgctgctaatcat
caacaaaatactgtcatccaggatcaggttgatgattcaactttgccggatggtaactct
gacactgttttgaagaccccacctcccaagaatagtgtccttggttcttctgcggctaca
acaccaactgggaatcatgcagcctcaggttctctgaatggtgcagtgcttgggtctggc
ttgtccgctccattagcaattctcccaggttcaagtactgttcgtgctgtattggagact
acaggtgctcctaattcatctccggtaaatctgcccacttctgcaaaggatgaagaaact
agcttccctggccgtaaactgtctccttcattttccgattctggacttgtcagaggtgga
atgggaagaggtgtcattgccaatcaaccaccctctagttcctcccatacttctggtatt
gtggttcctagcactataactcttggtaacgttccttcagcctctgaagtcacaaagaga
aactttttgggagctgaagaacgggctggtaacagtggcataacgcagtctatggtttcc
cctttaagtaatagaatggttttgccttcagcggctaaggttagtgatgcaacaagcacg
gtggatcctggtaatgttagtgatgcagcagctataggtggtcgagttttctcccaatct
gtggttcctagcatgcagtggaggccaggaagttctttccaaaatccgaatgaaggaggg
cagtttcgtggaagagctgaaatagcgccagatcagagagagaagttcttgcagcgtctc
cagcaagttcagcaacagggccatggtacacttcttggcatgactcttggtggagggaat
cacaagcagttttcttcgcaacaacaaagttcacttctgcagcagttcaattcccaaaat
tcatctgttagttctcaagctggtttaggaattggagttcaagcaccaggagttaatgct
gttacaactggttcattacagcagcagcaaaattccttccagcagtctaatcaacaggca
ttaatgacaagtggggcaaaagattctgatgttgcccatgcaaaagctgaggacgagcag
caacaacagcagcaacagagtatacctgaggatacttctgatcctgctgctggttctgtc
cttggaaagaatctgatgagcgacgatgatttaaagggctcatatccaatagatgctcct
gttggcgtacctgtttcattgaccgagactgcttcagtgtcgagggaagatgacctttct
cctggtcaacctttgcagcctggccaaccttctggaagtcttggtgtcattggccgaaga
agtgtttctgacttgggtgcaattggcgataaccttggtggaccctctatgactactgga
ggaattcatgatcaattatataatttgcaaatgcttgaggctgcatactacaagctacct
cagcccaaagactcagagcgtccaaggagctatactccaagacaccctgcaattactcct
ccgagctatcctcaagtacaggcacctattataaataatcctgctttatgggaccgttta
ggtcttgagacttacggcactgacacgttgttctttgcattttactatcagccgaacacc
tatcaacaatatttggctgctagagaattaaagaagcaatcttggagatatcacagaaaa
tatcagacatggtttcaaagacatgaagagccaaaagttgctacagatgaatatgagcag
ggaacttatgtgtacttcgatttccatgttaataatgatgacctacaacatggatggtgc
caaaggattaaaactgagtttacctttgagtataactaccttgaagatgaactcaatata
tag
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