Momordica charantia (bitter melon): 111022989
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Entry
111022989 CDS
T05045
Name
(RefSeq) WD repeat-containing protein 43 isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111022989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcha03009
]
111022989
Ribosome biogenesis [BR:
mcha03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111022989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
Utp12
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_ACSF4
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_HPS5
PQQ_2
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
111022989
NCBI-ProteinID:
XP_022156018
UniProt:
A0A6J1DPG2
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All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MCLFFYFFIILNFRIMGLSNIRDLLTSYSSDLHFFAISSGDGRIKIWDTLKGQIQAEFAD
FFTSNSTSILTKPEKGHLSIDYKCMKWLSWEKKRKRKRQCSLLLLGTGSGDVLALDVSAG
ELKWKISDCHPGGVTTISFPTHGQCIYTAGANGMLCEIDSLTGNLLRKFKASTKPISCIS
VSPDGKIIATAAAQMKIFNCSDHKKIQKFSGHPGAVRCMVFTEDGKYILSSAVGERYIVI
WSLGGEKKQSASCVLAMEHPAVFVDXRCMKNGAGETTLNILAISEIGVCYYWYGQNLEEL
RNAKPTKVSISDNDISSKSKKWAIPAIYTAKLHGIPKPGSVQVFLAHGLPVKPCFQTVVV
HSGTDIILSSSHDGILLPNQSIGKFKKGLDVQGGVVVLDRANVEDALRPIPKVFNSQEKS
TLYQDLQVGRNEVMTQLVDNRSRSEDDAGEEGSTAVCIEDQLRSLGILNTTDDHTSESIL
KSTIFKGIDLEANMSQKKLREAVLSLAPVDACKLLRNLVNIWQSRLRSGKNVLPWIYSLL
LNHSQHVLSQEQSNQILDSLFKITKSKETAVQPLLQLSGRLQLVLAQIERASANITDPAI
QRGPVIDENESDDDDEEVDDVLYGEEEYESELSSDXEN
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttatttttttatttttttattattctaaatttcagaatcatgggattgtcaaat
atcagagatctactgacatcttatagctctgatttgcatttctttgctatcagctctgga
gatggtcgaattaagatatgggacacattgaagggccagatacaggctgaatttgcagat
ttctttacatctaattcaacgagcatactcacgaaaccagaaaaagggcatctatcaatt
gattacaaatgcatgaagtggttgtcatgggaaaaaaagagaaaaagaaagcgccaatgt
tcgttgttattgttaggaactggtagtggggatgtgttggctcttgatgtatcagctggt
gaattgaagtggaaaataagtgattgtcatcctgggggtgttactacaatttcatttcct
actcatggtcaatgcatttataccgctggtgccaatggaatgctatgcgaaattgattct
ttgacgggaaacctgctgaggaagtttaaggcttccacaaagccaatatcttgtatttct
gtttcaccagatggcaagataatagcaactgcagctgcacaaatgaagatcttcaattgt
tctgaccacaaaaagatacaaaagttttctggtcatcctggagcagttcgatgtatggtt
tttactgaagatgggaaatacatcctctcgtccgctgttggtgaaaggtatattgtgatt
tggagtttaggtggagagaaaaagcagtcagctagttgtgttcttgcaatggagcaccct
gctgtctttgtggacrgtaggtgcatgaagaacggagccggtgaaactactctaaacatt
ttggctatatcagaaattggtgtttgttattattggtatggacagaatcttgaggagtta
cgaaatgccaagcctactaaagtatcaatatctgataatgatatttcctccaagagtaaa
aaatgggcgatacctgcaatttacacagcaaaattacacggaattcctaaacctggctcg
gtgcaagtgttccttgcacatgggttgccagtgaaaccatgctttcagactgttgtggtg
cattctggaactgacattatcttaagcagctcccatgatggaattcttctaccaaatcaa
tcgattggaaagttcaagaagggcttagatgtacagggtggagtggttgtattagatcga
gctaatgtcgaagatgccttacgtcccattccgaaggttttcaattctcaagagaaaagc
accttatatcaagatttgcaagtcggccgcaatgaagtaatgactcaattagtcgacaac
aggagccgatcagaagacgatgctggagaagagggctctacagcagtttgcattgaggac
caacttcgatcgctaggcatactgaacactacagatgatcatacatctgaatccatcctg
aagtctacaatattcaagggcatcgatctcgaagctaatatgtcgcagaaaaaattaaga
gaggcagtcttatcattggcaccagtcgatgcatgcaagttactcagaaacttggttaac
atctggcaatccaggttgcgtagcggaaagaatgttctaccatggatttatagtttattg
ttgaatcacagccaacatgtcttgtctcaagaacaatcgaatcagatacttgattctcta
tttaagattactaaatccaaagaaactgcggttcagcctctacttcaattatcaggtcgc
ttgcaactggtattggcacaaattgaaagggcatcggccaacataaccgatccagcgata
caacgcggtcccgtaatagatgaaaatgagagtgacgatgatgatgaagaagtcgatgat
gttctttacggggaagaagaatatgaatctgagttgagtagtgatgrtgagaattag
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