Momordica charantia (bitter melon): 111023013
Help
Entry
111023013 CDS
T05045
Name
(RefSeq) rRNA biogenesis protein RRP5 isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcha03009
]
111023013
Ribosome biogenesis [BR:
mcha03009
]
Eukaryotic type
90S particles
Other 90S particles
111023013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
111023013
NCBI-ProteinID:
XP_022156043
UniProt:
A0A6J1DPI8
LinkDB
All DBs
Position
Unknown
AA seq
1929 aa
AA seq
DB search
MAPPSKKSLDGPKFNKHSKKAFKSKKKPNDIARTEAMSLQIEDDVPDFPRGGGGSLSQMK
REKVHAQGDEEFRTGDLKMTTKRGKMRRKHSSNEDDLDSLLNSGVVGNLPKYANKITLKN
ISPRMKLWGVVAEVNKKDLVISLPGGLRGLVCAADAFDPISEKEIEDPEHDLLSVMFQVG
QLVPCVVLKVDDDNKESGKRKIWLSLRLSIMYKDFSLDLLQEGMVLTSYVKSIEDHGYIL
HFGLNSFTGFLPKTSQSGPGNDVQVGQLLQCVIRSIDKTRKVVYLSSDQDIVSRCVAKDL
KGISIDLLVPGMMVSARVQSTLENGIMLSFLTYFNGTVDMFHLQDSFHSSNWKAHYNQNM
KVNARILFIDPSTRAVGLTLIPHLVHNRAAPPNVRIGDIYDSAKVVRVDRRSGLLLEVTS
SPESTPTFVSVSDMAEEVVKKIEKKFKEGSHVRVRILGFRHLEGLAIGTLKASAFEGPVF
SYSDVKPGMLIRAKVIVVDNFGAIVQFPGGLKALCPLCHMSEFEIAKPRKKFKVGAEFIF
RVLGCKSKRITVTNKKSLVKSKLEVLSSYADAIAGLVTHGWITKIEKHGCFVRFYNGVQG
FAPRFELGIESGSDPSSTYHIGQVIKCRITSSVPSSKRISLSFVMKPARVSGDEKVELGS
IVSGVVDEITQTHVTFYINRTSYSRGRISTEHLSDHQVHAALMKSVLKPGYQLDKLIVLD
IEGESLILSAKQSLINLAHQLPSDSSQVNRYSVIHGFICNIIETGCFVRFLGRLTGFSPR
NKAIEDQKFDLHEAFYVGQSVRSNVVDVINETGRITLSLRQSTCFSTDASFMLEYFMTEE
KIAKLQSLDESDWAEEFAIGSVVEGKVQEVKDIGVIISFEKYHDVFGFIALHGSSGSTVE
TGSTIQAAVLDVSRTERLVDLSLKPELVDKRKGQNSSRKTSKKKRKVEALEDLEVNQTVQ
TLVEAVKENYLVLSLPEYGYTIGYASTYDYNTQRFPQKQFTIGQSVVASVAALPCPSTFG
RLLLLLKSISEAIVTPGSKRSKKNSSCEVGSLVHAEITDIQPLEMRLKFGVGLRGRVHVT
ECCAQVSNEHDETSEAPFSNFRVGQTVVARIVAEANRAANRRKGYLWELSVKPEALKDSS
GVVSEITNEDLGFSIGQRITGYVCNVSGEWAWLAVTREVTAQLFILDSSCEPTELQEFSK
RFNVGRAVSGHISNINGEKKILRLVLRHLSTTPRGRIDQENFKISNLPTEIISKKVACHF
NEGDIVGGRISKVLPGVGGLLVQIGPHMSGRVHYTEITDSLVPDPLSGYSEGQFIKCKVI
EIAHSVKGTTHIDLSLRSSAGLLYQNNVEHSNHENISSQRVEKIEDLHPNMEVQGYVKNV
SPKGCFILLARCLEAKILLSNLSDGYIDDPEKEFPIGKHVRGRILSLEPLSKRVEVTLKS
VTKNGALRANNYDLRSFSAGEVISGKIKRVESFGLFITIDDSDVVGLCHASEVSDDRIDN
LEFRYHAGDKVKAKVLKVDEKRHRIALGMKSSYIGESSEIYTHVEQEHDDVTDDDDLIGD
IRLPMHLDSSSTMFQNMDIELDSVEPEQPLSLAESRAFVPPLEVNLDDVDETDMDGLRCE
NKELVSVADSPREKDRREKKKAKEEREKEVRAAEERLLQNNVPTTADEFEKLVRSSPNSS
FVWIKYMAFMLSMADVEKARAIAERALRTINIREENEKLNVWLAYFNLENEYGNPPGDAV
TKIFQRALQCNDPKKVHLALLGMYERTEQHKLSEELLDKMIKRFKHSCKVWLRRIQSLLK
NGQDEVQSIVNRALLSLPRRKHIKFISQTAILEFKCGVADRGRSMFEGILREYPKRTDLW
SIYLDQEIRIGDADMIRALFERATSLSLATKKMKFLFKKYLEYEKSVGDEGRIESVKQKA
LQYVESALA
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaccttcaaaaaaatcactggatggcccaaagttcaataagcattccaagaag
gcattcaaatcaaagaaaaaaccgaatgatatagctagaaccgaagccatgtcgttgcag
attgaagatgatgttccggacttccccagaggcggaggtggttcattaagccaaatgaaa
cgtgaaaaagtacatgcccaaggagatgaggagtttcgaaccggagatctgaagatgaca
acaaagaggggaaagatgagaagaaagcattcatcaaatgaggatgatttggactcccta
ttgaacagtggtgtagtggggaacctccctaagtatgcaaataagataactttgaagaat
ataagtccaagaatgaaactttggggagtcgttgctgaagtaaataaaaaggatcttgtt
attagtctgcctgggggcttacgtggattagtgtgtgctgctgatgcttttgatccaatt
tcggaaaaagaaatcgaggatccggagcatgatttactttctgtcatgttccaagttggg
caactggttccatgtgttgtgctgaaagtggatgatgacaacaaagaatcagggaagaga
aagatctggctttcattacgtttatctattatgtacaaagacttctcattggaccttctt
caagaaggaatggttctgacatcatatgtgaaaagcattgaagatcatggctacattctt
cattttggtttgaattccttcacggggtttttgccaaagaccagccaatctggaccagga
aatgatgtgcaggttgggcaacttcttcaatgtgttattagaagcattgacaaaactcgc
aaagtagtttatttgagttctgatcaagatattgtgtccagatgtgtggcgaaggatcta
aaaggtatttcaattgacctcctcgtccctggaatgatggttagtgcacgtgtacaatca
accctcgaaaatgggatcatgctatcctttctgacttattttaatggaactgttgatatg
tttcatttgcaagatagttttcattcttcaaattggaaagctcattacaaccagaacatg
aaggtcaatgctcggatattatttattgatccgtcaactagagctgtggggttgaccctg
attccacatcttgtccataacagggctgcacctccaaatgtgagaattggcgatatatat
gattctgcaaaagttgttagggttgatagaagatcaggactgcttcttgaagtaacctct
tctccagagtcaacaccaacattcgtcagtgtctctgatatggctgaagaggtcgtgaaa
aagattgaaaagaagtttaaagaggggagtcatgttcgtgttcgcattcttggctttaga
catttggaaggacttgccattgggactttgaaggccagtgcctttgaaggtccggtgttt
tcctactcagatgtgaagcctgggatgttgatacgtgctaaagttattgttgttgataat
tttggtgctatcgtgcaatttcctggtggtcttaaggctctgtgtcctctatgtcacatg
tctgaatttgaaattgctaaacctcgaaaaaaattcaaggttggggctgaattcattttc
cgcgtgcttggttgcaagtccaagagaataactgttacaaacaagaagtcactcgtaaaa
tcaaaactggaagttcttagttcgtatgctgatgctatcgcgggattagtgacccatggc
tggataacgaagattgaaaaacatggttgctttgtcaggttttacaatggtgttcaaggt
tttgctccgagatttgaactcggaatagaatctggttctgatccaagttcaacatatcat
atcgggcaagtcatcaaatgtagaataacaagctctgttccttcctccaagcgtataagc
cttagttttgtaatgaagcctgcaagggtttctggagatgaaaaggttgaattgggttct
attgtttcgggtgtggttgatgaaataacccagacccacgtaacattttatattaataga
accagttactcgaggggaaggatatccactgaacatttgtcagatcatcaggtgcatgct
gctttgatgaagtctgttttgaagcctggatatcaactggataaactcattgtactagat
attgagggggaaagtttaatcctctctgcaaaacagtctctaatcaatttggctcatcag
cttccatctgactcgagtcaagtaaatcgatattctgttatccatggattcatttgtaac
attatagaaactggttgttttgttcgctttctaggacgtttaactggcttttctccacgt
aataaggctattgaagatcaaaaatttgatctacatgaagcattttatgttggacaatcg
gttcgtagtaatgtagttgatgtgattaatgaaacgggtagaattacactttctttgagg
cagtcgacttgtttttcaactgatgcttcctttatgttggaatattttatgaccgaagag
aagattgcaaaacttcaatcattggatgaatcagactgggcagaagaatttgcaattggt
agtgtggttgagggaaaagttcaagaggtcaaggacattggagttattatcagctttgag
aagtatcatgatgtttttggttttattgcactccatggatcaagtgggtccacagtggaa
acgggttctaccattcaggctgcggttcttgatgtctccagaaccgaacgacttgtggat
ttatccttaaaacccgaattagttgataaacgcaagggacaaaattctagcaggaaaact
agtaaaaagaaacggaaggtcgaagcattggaggatttagaggtgaatcagactgtgcag
actttagtggaagctgtgaaggaaaactatctggttctttcactgccagagtatggctat
actataggttatgcatctacatatgattacaatacccaaaggtttcctcagaaacaattt
acaatcggacaaagcgttgttgcttctgttgcggctcttccgtgtccctcaacatttgga
aggctgcttctgcttctgaagtcaataagcgaggccattgttactcctggttccaaacga
tcgaaaaagaactcttcatgtgaagtgggatctcttgttcatgcagagatcactgatatt
cagcctcttgaaatgagattgaaatttggagttgggttacgtggacgagttcatgtcaca
gagtgctgcgcacaggtaagtaatgagcatgatgaaacttcagaagctccatttagtaac
ttcagggttggacaaacagtagttgcaaggattgttgcagaggctaatcgtgcagctaac
agaagaaagggctacctatgggagttgtctgttaaacctgaagctcttaaggattccagt
ggtgtggtaagtgagattacaaatgaagatttggggttttcaattggacaacgaatcact
ggctatgtttgcaatgtcagtggtgagtgggcttggttagctgttactcgagaagtgact
gcccaactatttattcttgatagttcttgcgagcctactgaacttcaagagttttccaag
cgcttcaatgttggaagggctgtttctggtcacatatctaacattaatggcgagaaaaaa
atcttacggttggttttgcgtcatttatctaccaccccaagaggaagaattgatcaagaa
aattttaagataagtaatttgccgacggaaattataagtaagaaagtcgcatgtcatttc
aatgaaggagacattgttggtggaagaatatcaaaagtacttccaggtgttggtgggctg
cttgttcaaattggtccccatatgtctggcagggttcattatacagaaattactgacagt
ttggtgcctgatccgttgtctggatatagtgaaggacaatttatcaagtgcaaggttata
gaaattgcccattcagttaaaggtacaacacatattgatttgtcactacgatcttcagct
ggcctcctctatcagaacaatgtagaacacagtaaccatgaaaatatttcttcccaacga
gtggagaagatagaagatcttcatcccaatatggaggttcagggttatgtgaaaaatgtt
tctccgaaaggatgcttcattttgctcgcgcggtgcttggaggcaaaaatcctcctatct
aatttatctgacggatatattgatgatcctgagaaggagttccccatcggaaaacatgtc
cgtggaaggatattgtctttggagcctttgtcaaagcgagttgaagtcaccctgaagtcg
gtgactaaaaatggtgcattgagagcaaataattatgatttaagaagtttttctgctgga
gaagttatatctggaaagattaaacgggtggagtcatttggtttgtttatcaccattgat
gattcggatgtggttgggctgtgtcatgcgtcagaagtttcagacgatcgtattgataat
ctagaatttagataccatgctggggacaaagtgaaagcaaaagtactaaaggtggatgag
aaaagacatagaattgctctgggaatgaagagttcatacataggagaaagcagtgaaatt
tatacgcatgtggaacaagagcatgacgatgtcactgatgacgatgatcttattggtgat
attagactgccaatgcatctagatagcagttcaaccatgttccagaatatggatattgaa
ttggacagtgttgagcctgaacagccacttagtctagcagaatcaagggcttttgttcct
ccacttgaggtcaatcttgatgatgtagatgaaactgatatggatggtttacggtgcgaa
aataaagagttggtgagtgttgcagactctccaagggaaaaggacagacgagagaagaaa
aaagctaaagaagaaagggaaaaagaggtgagggctgctgaggaaagattattgcagaat
aatgtgccaactactgctgatgaatttgaaaaattggtcagaagctctcctaacagcagt
tttgtttggataaagtatatggcattcatgctatctatggctgatgtggagaaagcccgt
gcaatagctgagagggctttgaggacaatcaatattcgggaagagaatgagaagcttaat
gtctggttggcttactttaatctggaaaacgaatatggaaatcctccaggggatgctgta
accaaaatttttcaacgagcgttgcagtgtaatgatcctaagaaggttcatttagcgttg
ctgggaatgtatgagaggacagagcaacataagttgtcagaggagctcctggacaagatg
atcaagaggttcaaacattcttgcaaggtttggctaaggcgaatccagagtttgttaaag
aacggacaagatgaagttcaatcaatcgtaaaccgtgcactactaagccttccacgacgt
aagcacattaaatttatctcacaaacagctattcttgaattcaaatgtggggtggcagat
cgaggtcggtcaatgtttgaaggaattcttcgagagtacccaaagagaacggacttgtgg
agcatctatcttgatcaagaaattcggattggtgatgctgatatgatacgtgctctgttt
gagagggcaactagtttatctcttgctaccaagaagatgaagttcttattcaaaaaatat
ctggaatatgaaaagtctgttggtgatgaaggacggatcgaatcggtgaagcaaaaggca
ctgcaatacgtcgagagtgcactagcctga
DBGET
integrated database retrieval system
