Momordica charantia (bitter melon): 111023239
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Entry
111023239 CDS
T05045
Name
(RefSeq) small nuclear ribonucleoprotein E-like
KO
K11097
small nuclear ribonucleoprotein E
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111023239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111023239
03041 Spliceosome [BR:
mcha03041
]
111023239
03032 DNA replication proteins [BR:
mcha03032
]
111023239
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
111023239
Spliceosome [BR:
mcha03041
]
Complex A
U1 snRNP components
Sm proteins
111023239
U2 snRNP components
111023239
Complex B
U1 snRNP components
111023239
U4/U6.U5 tri-snRNP components
111023239
Complex C
U2 snRNP components
111023239
DNA replication proteins [BR:
mcha03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111023239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
111023239
NCBI-ProteinID:
XP_022156313
UniProt:
A0A6J1DT21
LinkDB
All DBs
Position
Unknown
AA seq
88 aa
AA seq
DB search
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
NVKKKSRKTLGRILLKGDNITLMMNTGK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaccaaagttcagaggattatgacccaacccattaacttgattttcaggttt
cttcaaagtaaagctcgcattcagatatggctttttgagcagaaagacctgaggatcgaa
ggccgcatcattggcttcgatgaatatatgaatttggttctcgatgatgcagaggaagtc
aacgtaaagaagaagagcaggaagactttagggaggatactccttaaaggagacaacata
actctgatgatgaacacgggaaagtga
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