Momordica charantia (bitter melon): 111023389
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Entry
111023389 CDS
T05045
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111023389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcha03021
]
111023389
03036 Chromosome and associated proteins [BR:
mcha03036
]
111023389
Transcription machinery [BR:
mcha03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111023389
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111023389
PBAF complex
111023389
GBAF(ncBAF) complex
111023389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
111023389
NCBI-ProteinID:
XP_022156506
UniProt:
A0A6J1DV59
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MSMNNNNPPKSLGAASSSPFGNSGIVPPSMAANSTFSQPQAQPQLGAGFQTPFQLSPAQA
FAQAQLKAQVHAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSPSPGFSTPGLAGV
KRIPQKPPVRPPILSPSTTFSPLKTMEITPAARKKKQKLPEKQLQDKVAAILPESALYTQ
LLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPTWT
LKIIGRILEDGIDPDHPSVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSP
APHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK
ARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGNSP
AGTACYDVLVDVPFPIHRELSALLANAEKNKEIDSCDEAICTAIRKIHEHRRRRAFFLGF
SQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRKPTTGS
DAPGST
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaacaataataatccgccgaagagcctgggggcggcatcttcatcgcctttt
ggaaattctggaatagttccaccatctatggcggcaaattcgaccttttcccagccgcaa
gctcaaccccaattaggagctggctttcaaactccatttcagctctccccagctcaggct
tttgctcaagctcagttaaaggctcaagttcatgcccaagctcaagcacaagcggctcac
gcccagtttcaagctcagttacaagctcaggggctgtccctaactcagagtcagactgtt
ggtggtgggaacatgggttctccttcaccaggattttccacgcccggccttgcaggtgtg
aagcggattcctcaaaagccaccagttcggcctcctattctttctccctctaccacgttt
tcgccattgaaaacaatggaaatcacgcctgctgctcgcaaaaagaagcagaaactaccg
gagaagcagcttcaagacaaagttgctgcaatcttacccgagtctgctctctacactcag
ctgcttgagttcgagtctcgtgttgatgctgctcttgcaagaaaaaaggtcgacatccat
gaggcgcttaaaaatccgccttgcattcagaaaactcttcggatttatgtcttcaacaca
tttgcaaatcaagttaacacaatacccaaaaaaccaaatgcagaccctcctacctggacc
cttaagataataggtagaatcttggaagatgggatcgaccctgatcatcccagtgtggta
caaagatcaaaccctttgtacccgaagttttcatctttcttcaagagagtaaccatttcc
ttggaccagaggttatatccagacagtcacattattgtatgggagaatgcgcggtcacct
gcaccccatgagggctttgaggtgaagagaaaaggggataaagagttttcggttaacatt
cggttagaaatgaattatattccagagaaatttaagctgtcacctgctttaatggaagtt
cttggtattgaagtcgatacccgcccaagaataatagctgcaatctggcattatgtaaag
gctagaaaacttcagaatcccaatgatccatctttcttccattgtgatccgcctcttcaa
aaggtctttggggaagataagttgaaattcaccatggtttcacagagaatatcacagcat
ttattccctccgcagcctatacatctggagcataagattaagctttcggggaatagtcca
gcgggtacggcatgttatgatgtgttggttgatgtaccttttccaattcacagggaactg
tctgcattattagccaatgcagagaagaacaaggagattgattcatgtgacgaagcaatc
tgtacagctataagaaaaattcacgagcatcgtcggagacgtgcatttttccttgggttc
agtcagtccccagttgagtttattgatgccctgattgaatctcaaagcaaggatctgaaa
cttcttgcgggagaagctagtcggaatgctgaaaaggagcgccggtcagatttcttcaat
caaccatgggttgaagatgccgtaatccgatacataaatcgcaaacccacgacaggaagy
gatgcacccggaagtacatga
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