Momordica charantia (bitter melon): 111023541
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Entry
111023541 CDS
T05045
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111023541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcha03021
]
111023541
Enzymes [BR:
mcha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111023541
Transcription machinery [BR:
mcha03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
111023541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
111023541
NCBI-ProteinID:
XP_022156695
UniProt:
A0A6J1DR19
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MHVFSHSPDFCHSNVYEVGYSSERLKCFHLIXWFLFLVQNNLCTPKNGEILVASTQDFLT
SSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPTIVKPIELWTGKQLFSVLVRPHAS
MKVYLNLTVKEKSYSKVKGNERERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDGLY
SVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGEQLIKQKQTTILEGYRBC
DKQINLFNTGNLPPEAGCDAAQSLEAKITQILNGIREATANVCMQNLHWRNSPLIMSQCG
SKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFQRKAKTPAAKGFVANSFYSGLTA
TEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGD
DGMDPAQMEGKSGAPLNFERLFLKAKATCPIDGNKILSPSEFSETVEDRLSKNDATPEGG
CSVAFIESLKIFLNKYVETQKRAWSALLADNESDAGKTIIGSSENDNIVIRKKVVQNIAG
VTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL
GVPRIKEIINGAKRISTPIVTAALKHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRS
ALIEIKLDMEKIRDAELYIDANVVKQAILLTPKLKLKHEHINVLDDRKLRVLPQDADRSK
LHFNLHFLKNMLPIVVVKGIKTVGRAVIKEEKDKVRNAKKFSLLVEGTGLQAVMGTEGVD
GCSTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLG
ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKV
RQRASVPQHLPYGPDAILS
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgcatgttttctctcattctcccgatttttgtcactctaatgtatatgaagttggatac
tcttctgagaggctcaagtgtttccatttgatcraatggtttctttttttggtgcaaaat
aatttatgcactcccaaaaatggggagattttagttgcttcaactcaagattttttgaca
tcatcttttctcataacaagaaaagacacattttatgaccgtgcagcattttctcttatg
tgttcttatatgggagatggcatggatttggttgacttgcctacacctacaattgttaaa
ccaattgaactttggactggcaaacaattatttagtgtcctggttcgcccacatgcaagc
atgaaggtctacctgaatcttacagttaaggagaaaagctacagcaaagttaaaggaaat
gagagagagcgagaaactatgtgtcctaatgatgggtttgtctacttccgcaatagtgag
ctaatatcaggtcaagttgggaaggctactttaggaaatggcaacaaggatggtctttat
tctgttcttcttagagattacaaggcacatgctgctgctgtttgcatgaatcgtcttgct
aagctgagtgctcggtggataggtaaccatggtttctctattggaattgatgatgtgcaa
cctggagagcaattgatcaaacaaaaacaaacaactattttggagggttatcgtractgt
gataagcagatcaatttgttcaacacaggaaatttacctcctgaagctggctgtgatgct
gctcaaagtttggaggctaagataactcaaattttaaacggtattcgagaagctactgca
aatgtgtgtatgcaaaacttacattggagaaacagcccattgattatgtcgcaatgtggt
tccaaaggatctcctattaatattagccagatgattgcttgtgttggtcaacagtcagtt
gggggccgccgtgcacctgatggattcatagatcggagccttccccattttcagagaaaa
gcaaaaactccagcagccaaaggcttcgttgcaaattccttctacagtggcttgacagca
acagagtttttctttcatactatgggaggacgagaaggccttgtggacacagcggtgaaa
acagccgacactggctacatgtctcgtagattgatcaaagcattggaagatttatccatt
cattatgacagctctgtacgaaatgctggtggatgtatagttcaattctgttatggggat
gatggaatggatccagcgcaaatggaaggaaaaagtggagcacctttgaattttgagcga
ttatttttgaaagctaaggctacatgtcctatcgatggaaacaaaatattgtctccatca
gaattttctgaaacagtagaagataggctctcaaaaaatgatgctactccggaggggggt
tgctctgtagcattcattgaatctctcaagattttcctcaacaaatacgtagaaacacar
aaaagagcatggagcgcattgttggcagataatgaatcagatgcaggaaaaacaatcatt
ggaagttctgagaatgataacattgtgattcggaagaaggtagtccaaaatatagctggt
gtcacacacagacaactacaggtttttttggacacctgcttgtctcgctaccatacaaaa
aagattgaagctggaactgccatcggtgccattggagctcaaagtattggagaacctggg
acacaaatgacactaaaaacatttcactttgcaggagttgctagcatgaacgttactctt
ggtgttccccggatcaaagaaattataaatggagccaaaaggattagcacaccaattgtc
actgcagcacttaagcatgatgataatgtgaatattgcccgratggtaaaagctcggata
gagaaaacaaatctaggacagattgcaaagtgcatacaaattgtaatgagttccagatca
gctttaatagaaatcaaacttgacatggagaaaatcagagatgcagaactctatatagat
gccaatgttgtaaaacaagcaattcttcttactccgaaactcaaactgaagcatgagcat
attaatgttttggatgatagaaagttacgagttcttcctcaagacgcagataggagtaaa
cttcattttaatctacacttccttaaaaacatgcttccaatagtcgttgtaaagggtata
aaaactgttgggcgtgctgtcatcaaagaggaaaaggacaaagtaagaaatgccaaaaag
ttcagtttgctggttgaaggaacgggacttcaagctgttatgggcacggagggagttgat
ggatgcagcacaaagagtaatcacatcattgaagtgcaacaagtactcggaattgaagct
gcaaggaaatgtattattgaagagataaaatataccatggaaagtcatggaatgagcata
gacatacgtcatatgatgcttttaggagatttgatgacattcaggggtgaagttcttgga
atcacaagatttggcattcaaaaaatggacaaaagtgtactgatgctggcttcattcgag
aaaaccgctgatcatctttttaatgcttcggtaaacggaagggatgacaaaattgaagga
gtcagtgaatgtgtaatcatgggcataccgatgccactaggcactggcatgctaaaggtt
agacaaagagcttctgtgccacaacatctgccttatggaccagatgcaattctatcttga
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