Momordica charantia (bitter melon): 111024207
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Entry
111024207 CDS
T05045
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111024207
Spliceosome [BR:
mcha03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111024207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_7
NRDE-2
TPR_MalT
UTP6_C
TPR_12
Motif
Other DBs
NCBI-GeneID:
111024207
NCBI-ProteinID:
XP_022157538
UniProt:
A0A6J1DTL7
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MGDTETVVAQTSQVMGYTSAGYVSSGYADSSSNLIPHAGAFQSVTTADFSVSSTSADMGD
GNAYVTDPNSVHQGNHVGEVDETKAAVVGTDHTQNADVSENTAMETAEAVSRDTSLNGSV
AAEEVNASSLENGNVNENAGEASEEQHFVDGSSVPPLSAEEDRLWNIVRANSLDFNAWTS
LIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHG
VTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWG
RLAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGNQVNGEEGH
PDAAEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLN
VAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASNSMDLANNA
LARASQVFVKRRPEIHLFAARFKEQNQDIASARASYQLVHTEISPGLLEAIIKHANMEHR
LGNLEDAYSVYEQAIAIEKGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGE
LSKPLIEALIHFEAIQSTAKRIDYLDSLVEKVIMPNTENPTVVSASMREELSSIFLEFLN
LFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKPYPSVASPAQSLMG
AYPTGQNQWAASYGLQPQAWPPVAQAQGQQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQ
ASTYASYPPTYPVQQAYSAQSYAQPTAQAATLAPSQQPASAAQPYYGGYYMNG
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgggggacactgaaactgtagttgcccaaacatctcaagtcatgggatatacatctgct
ggatatgtttcaagtggctatgcagatagcagttcgaatctaattcctcatgccggcgct
tttcaatctgtgaccactgcagacttttctgtttcatctacctctgcagatatgggggat
ggaaatgcttatgttacggatcccaattctgttcaccaaggaaatcatgttggtgaagtg
gacgagacaaaggcagctgttgtagggaccgatcatactcagaatgctgatgtatcagaa
aatacagcaatggaaactgctgaagctgtcagtcgtgatacttctttaaatggaagtgtt
gctgccgaagaagtcaatgcgtcatcacttgagaatggaaatgttaatgagaatgccggc
gaggcatctgaggaacaacactttgttgatggttcttctgtacctccgctatctgctgaa
gaagatagactgtggaacattgtgagggctaattcattagattttaatgcttggacttct
ttgatcgaagagacagagaaggtggcagaggacaacatactgaaaatccggagagtttat
gatgcctttttagcagaatttcctttatgctatggctattggaagaagtatgctgatcat
gaggcacgttttggatctactgataaagttgttgaggtgtatgaacgagcagtacatggg
gttacttactcagttgatatttggctgcattattgcatattcacgcttagtacttatgga
gatccagagaccattcgaaggcttttcgagagaggattagcttatgtcgggacagattac
ctctcttttcccctttgggataaatatattgaatatgagtacatgcagcaggagtggggc
cgtcttgccatgatatatacacgtatactggagaatccaaatcaacagttggatcggtat
ttcaatagctttaaggagttagctgcaagtcgacctttgtcagaattgaagagttctgag
gaagctgtagtagatgtgcaatcagaggctggtaatcaagtaaatggggaggaaggtcat
cctgatgctgcagaaccatcatctaaaactgtaagtgctggcttaacagaagcagaggag
ttggagaagtatatcgccattagagaagaaatctataagaaagctaaagagttcgattct
aagatcattggttttgaaacagctatcagaaggccctactttcatgttcggccactaaat
gttgcagagcttgataattggcacagttacctggattttatagaacaagaaggagactta
aataaggtggtgaagttatacgagagatgtgttattgcttgtgccaactaccctgagtac
tggatacgatatattttatgcatgcaagcaagcaatagtatggatcttgccaataacgct
cttgctcgggcaagccaagtttttgtcaagagacgaccagagatccatttatttgctgct
cggttcaaggagcagaatcaggatattgccagtgctcgagcctcatatcaacttgtgcat
actgaaatttcacctggtcttcttgaagcaattattaagcatgctaatatggaacatcgt
ctgggtaacctggaagatgcgtactctgtatatgaacaggccattgctattgaaaaagga
aaagaacattctcgtgcattgccactgttatatgctcagtactcgaggtttctgaacttg
gtatgtaagaatgaaggaaaagctagagaaattctggataaggcagttgagcatggtgaa
ttatctaaaccactcattgaggccttgatacattttgaggcaattcagtcaacagcaaag
agaattgattatttagattcattagttgagaaggtcataatgcccaatacagagaatcca
actgtcgtgagtgcttcaatgagggaggagttatcaagcattttcttggagtttctgaat
ctctttggagatgttcagtctatcaagaaggccgaggatagacatgccaagctattcatt
tcacataagagtacatcagaattgaaaaaacgccttgcagatgattatctagcttctgaa
aaagcaaaaatggccaaaccttatcctagtgttgcttcaccagcacaatctttgatgggt
gcttatccaaccggtcaaaaccagtgggcagctagctatggtctacaaccacaagcgtgg
cctcctgttgctcaagcgcaggggcagcaacaatgggcgcctggatatacccaatcggcc
tcgtatagtgggtatggaagcacttacacgaatccacaagtgtccacatcagtgtcacaa
gcttccacttatgcctcgtatcctcctacataccctgtccagcaggcgtattcagctcag
agttatgcccagcctactgctcaagcagcaacgttagcaccatcgcaacagccagcttca
gccgctcagccatattatgggggctactacatgaatggataa
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