Momordica charantia (bitter melon): 111024229
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Entry
111024229 CDS
T05045
Name
(RefSeq) DNA mismatch repair protein MSH7 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111024229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111024229
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111024229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
111024229
NCBI-ProteinID:
XP_022157566
UniProt:
A0A6J1DYJ9
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MQRQKSLLSFFQKSPSDKRISDGGASSIGQRLTRFPAKQGVSGLEQPAIKTTADPSLEIR
GTDTPPEKVPRQILPVIEKNKGSSLFSSIMHKFVRVDDKRKAHQRDEVQKDSSHDEVRRD
SSQLCSISGKVNDSKEFQRQEVASAHHDKLNAANLNGIRGPILVIVSDDEIPGPETPGMK
PSVSRLKRSQEDFLEDASGRCFQETTKRVKLLQDSINSNKIHNEVSDATSKFEWLNPSQV
RDANGRRPGHPLYDKKTLYIPPDVLKKMSASQKQYWNVKCQYMDVLLFFKVGKFYELYEQ
DAEIGHKELDWKMTLSGVGKCRQVGVPESGIDDAVQKLVARGYKVGRVEQLESSDQTKTR
GANSVIPRKLIQVVTPSTKVDGDIGPDAVHLLAIKEVSCGLDSNSIAYGFAFVDCAALKF
WTGVIKDDASCAALGALLMQVSPKEIIYEARGLSKETQKVLKKFSPTGSTALEFTSGSPV
TDFLEASEVKLLIQSKGYFKGSLNLWNHTVEDTVHDDIALCALGGLISHMSRMMLDDVLR
NGEILPYQVYRGCLRMDGQTMVNLEIFRNNDDGGPSGTLYKYLDNCVTSSGKRLLRLWIC
HPLKDVQEINIRLNVVEELMAESEVMLLLGTYLRKLPDLERLLGQIKATVQSSASLILPL
IRKKLQKRRVKLFGSLVKGLRTALDLLIQVQKEGYIISLSKVVKLPLVSGSGGLDQFLSQ
FEAAVDSEFPNYQNHDVTDSDAERLSILIELFVEKATEWSEVIHALNCIDVLRSFAVIAH
SSGGSMSRPVILPQSNNTTLITEKQGPVLKINGLWHPYALVENGETPVPNDIILGPDQDG
YHPRTLLLTGPNMGGKSTLLRSTCLAVILAQLGCYVPCETCTLSVVDIIFTRLGATDRIM
TGESTFLVECSETASVLQHATQHALVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLL
FATHYHPLTKEFASHPHVVLQHMACTFKDQELVFLYRLNSGPCPESYGLQVAAMAGIPGR
VVEAASRASQVLKKTIKENFRSSEQRSEFSTLHEEWLKTLITVSEFRGNDLDDTDAFDTL
FCLWYELKKSYHS
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccagaaatctttgttatccttcttccaaaaatctccgtccgataaacggatc
tccgatggcggtgcctcctccatcggccagcggctcactcgatttccggcgaaacaaggc
gtttctggtttggagcagccggctatcaaaaccaccgcggatccctcactggagatcaga
ggaaccgacactccgccggagaaggttccccgccagattttgccggtgattgagaagaac
aaaggttcttctctcttttcgagcatcatgcacaaatttgtgagagttgacgataaacgt
aaggcgcatcagagggatgaggttcaaaaagattcctctcatgacgaggttcgtagagat
tcctctcagttatgttccatttctggtaaggttaatgattcaaaagaatttcagaggcaa
gaggtagcttctgcacatcacgataaactcaacgctgcaaatttaaacggaattagagga
cctatcttggtaattgtaagcgatgatgagattcctggacctgaaactcccggtatgaaa
ccttctgtctcccgtttgaagagatctcaagaggattttctagaggatgcgagtggtcgt
tgttttcaggagactaccaaaagagttaaactccttcaggattcaataaactcaaacaag
attcacaacgaagtttctgatgcaactagcaaatttgagtggctcaatccctctcaagtc
agagatgctaatggtagaaggcctggccaccctctatatgataagaaaacattatacatt
ccacctgatgtgctgaagaaaatgtcagcgtcacaaaaacaatactggaatgtgaaatgt
caatatatggacgttttgcttttcttcaaagtggggaagttctatgagctatatgaacaa
gatgctgaaattggtcacaaggagcttgactggaaaatgacattaagcggtgttgggaaa
tgtaggcaggttggtgttcctgaaagtgggattgatgatgctgttcaaaagcttgttgct
cgtggatataaagttgggcgagttgagcagttggaatcttcggatcaaacaaaaaccaga
ggtgcaaattctgtgatacctaggaaattgatacaggttgtcactccgtcaaccaaggtt
gatggtgacattgggcctgatgctgttcatttgcttgccataaaagaggtgagctgtggg
ctggatagtaattcaattgcatatgggtttgcttttgttgattgtgctgctttaaaattt
tggacgggtgttatcaaagatgatgcttcctgtgctgctctgggcgctctcttgatgcaa
gtgtctccaaaggaaataatatatgaagctagaggactatctaaagaaacacagaaagtt
ctcaagaagttctcgccaactggttccactgctctagaatttacatcagggtctccagtt
acagactttttagaagcttcagaggttaaacttttgatccagtctaaaggatattttaaa
ggctccctaaatttgtggaatcatacagtcgaagacacagtccatgatgatattgctcta
tgtgctcttggaggccttattagtcatatgtcaaggatgatgttagatgatgtcttgcgg
aatggagaaatactgccataccaagtctacagaggctgcctaagaatggacggacaaaca
atggtcaatcttgaaattttcagaaacaatgatgatggtggtccatcaggtacactgtac
aaatatcttgataactgtgtgacatcatcaggaaagcggcttttgaggttatggatctgt
catcctcttaaagatgttcaagagataaatattaggctcaatgtagtggaagaactgatg
gcagaatctgaagttatgttacttcttggtacttatctccgcaagcttccagacttggag
aggttgcttgggcagattaaggccactgttcagtcatctgcttctcttatattaccattg
attcgcaaaaagttacagaaacggcgggtgaaactattcggatctctggtgaagggcctc
aggactgcacttgatttattgattcaagtccagaaggaaggttacatcatttctctatca
aaagtagtaaaacttccactggtcagtggcagcggtgggctcgatcaattcctctctcaa
tttgaagcagctgtagatagtgaatttccaaattatcagaatcacgatgtaacggattcc
gatgctgaaagactctctattctgatcgagttatttgtagaaaaagccacggaatggtct
gaagttattcatgccctgaattgcattgatgtgctgagatcttttgcagttattgctcat
tcgtctggaggatctatgtctagacctgttattttgcctcaatcaaataatacaacgttg
atcactgaaaagcaagggccagttcttaaaattaatgggctgtggcatccgtatgccctt
gtggagaacggagaaacacctgtcccaaatgatataatccttggccctgatcaagatggc
taccatccccgtactctactgctaactggaccaaacatgggtgggaaatcaacacttctt
cgttccacttgtctggctgttatacttgcacagttgggttgctacgtgccctgcgagaca
tgcacactctcggtcgtggatataatctttacgcgactcggtgctactgatcgaatcatg
acaggagaaagtacattccttgttgaatgctcggaaacagcttcagttctgcaacatgct
actcaacatgctcttgttattcttgacgaacttggccgaggaaccagcacatttgatggc
tatgccattgcatatgctgtgttccgccatctgatcgaaaaggtgaactgtcggcttctg
ttcgctactcactaccatcctcttacaaaggagtttgcctctcatcctcatgtcgtgctt
caacacatggcctgcacattcaaggaccaggagttggtttttctataccgccttaactcc
gggccgtgccccgagagttatgggttgcaagtagcagccatggctggaatcccggggcga
gttgtcgaagctgcttcaagagctagccaagtactgaagaaaaccatcaaagagaacttc
agatcgagtgagcaacgatcggagttttcgactctccatgaagagtggttgaaaactcta
atcacagtctcagagtttcgaggtaatgatcttgacgatactgatgcttttgatacatta
ttttgtttatggtatgagcttaagaaatcatatcacagctag
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integrated database retrieval system
