KEGG   Momordica charantia (bitter melon): 111024391
Entry
111024391         CDS       T05045                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD1b
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111024391
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcha03041]
    111024391
   03032 DNA replication proteins [BR:mcha03032]
    111024391
Spliceosome [BR:mcha03041]
 Complex A
  U1 snRNP components
   Sm proteins
    111024391
  U2 snRNP components
    111024391
 Complex B
  U1 snRNP components
    111024391
  U4/U6.U5 tri-snRNP components
    111024391
 Complex C
  U2 snRNP components
    111024391
DNA replication proteins [BR:mcha03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     111024391
SSDB
Motif
Pfam: LSM WHD_ArnR1 Gemin7 EBNA2_Core YomU_Tube
Other DBs
NCBI-GeneID: 111024391
NCBI-ProteinID: XP_022157762
UniProt: A0A6J1DVC4
LinkDB
Position
Unknown
AA seq 114 aa
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRGRGRGRGR
NT seq 345 nt   +upstreamnt  +downstreamnt
atgaagctcgtcaggtttttgatgaagctcaacaatgagactgtctcaatcgagctcaaa
aatggaaccgttgtccatggcactatcacaggtgtggacattagcatgaatacacatttg
aaggctgtgaaacttaccctaaaggggaaaaatccagttaccatggatcatttaagtgtg
aggggtaacaacatcagatattatattctccctgacagcttgaatcttgagactttactt
gttgaagagacacccagggtcaagcccaagaaaccaactgcagggaggcctttgggacgg
ggacgcggacgagggcgtgggcgtggtcgtgggcgtggacgctag

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