Momordica charantia (bitter melon): 111024564
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Entry
111024564 CDS
T05045
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03040
Spliceosome
mcha04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111024564
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111024564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111024564
04121 Ubiquitin system [BR:
mcha04121
]
111024564
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111024564
Enzymes [BR:
mcha01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111024564
Spliceosome [BR:
mcha03041
]
Complex B
Other components
Prp19 complex
111024564
Complex C
Prp19-CDC5 complex
111024564
Ubiquitin system [BR:
mcha04121
]
Ubiquitin ligases (E3)
U-box type E3
111024564
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
111024564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_HPS5
PROPPIN
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_Vps41
WD40_like
zf-Nse
Beta-prop_DCAF12
U-box
PAS_11
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
111024564
NCBI-ProteinID:
XP_022157967
UniProt:
A0A6J1DVX5
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MNCSISGEIPEEPVVSKKSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK
PRQAASIPGMLGMFQNEWDALVLSNFAVEQQLHTARQELSHALYQHDAACRVIARLKKER
DEARSLLAQAERQMPLSSTSISTNAAVNVNGKRVNEDEELGPDGKKIRPGITATVISELT
DCNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGG
LDTNAVLFDRSSGEILSTLSGHSKKVTSVKFVARDDLFLTGSADKTVRVWQQSDDGNYNC
RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVSEASGTEGYTSAAF
HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW
DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAMAGSDIRVYQVASVKSEWNCIKTIPDL
SGTGKATCLKFGPDAKYLAVGSMDRNLRMFGVPGEDGPMET
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaactgctctatctccggtgagattccggaagagccagttgtctccaagaagtctgga
ttactcttcgagaagcgtttaatcgagaggcacatttcagactatgggaaatgccccgtt
acaggtgaacccctttccatcgatgacatcgttccaattaaaactgggaagatagtcaag
cccaggcaagctgctagtatccctggaatgcttggaatgttccagaatgaatgggatgct
ttggtgctatccaattttgcagtagagcaacagctgcatacagctagacaggagcttagt
catgccttgtaccagcatgatgctgcatgtcgtgtgattgcaagacttaagaaagaacgg
gacgaagctaggtcattacttgcccaggcggagaggcagatgcccttgtcatcaacttca
atttcaaccaatgctgctgtcaatgttaatgggaaaagagtgaatgaggacgaggaattg
ggccctgatggaaagaagatacgtcctggaataacagccactgtgatctctgagctcaca
gattgtaatgctgctctttcacaacaaaggaaaaggcggcagataccccctacattggtt
cctgttgaggctctagaaagttacactcaaatatctagtcatccacttcataaaacaagc
aaaccgggcattatatctcttgacatccatcacgagaaggatgtcattgcractggaggg
ctggacacaaatgctgttctttttgatcgatcatctggagagatattatctactcttagt
ggccattcaaagaaggtaacaagcgtgaaatttgtggctcgtgatgatttattcttgact
ggttcagctgacaagactgttcgtgtgtggcaacaatctgatgatgggaactataattgt
aggcacattttaaaggatcacactgctgaggttcaagctgttaccgtccatgctaccaat
aacttctttgtcactgcctcccttgataacacatggtgcttttatgagcttgcttcagga
ttatgcctaacccaggtttcggaggcttcaggaactgagggctacacttctgctgccttt
catcctgatggtctcatccttggaacaggcacgtcggaggcacttgttaaaatttgggat
gtaaaaagtcagaaaaatgtggcaagatttgatggacacgttggggcagtaactgctata
tctttttctgaaaatggttacttccttgcgactgcagctcatgatggagtaaagctgtgg
gaccttcgaaaattgaagaatttccgtacatttgcaccttatgattcagaaacaccaaca
aactctgtggaatttgaccatagtggatcttaccttgcgatggccggctcagatataaga
gtgtaccaagttgcaagtgtgaaatctgaatggaattgtatcaaaactattccagattta
tctggcacaggtaaagcaacttgtttaaaatttggtccggatgcaaaatacttggcagtc
gggtccatggaccgaaatcttcggatgttcggagtgcccggggaggatggcccaatggaa
acataa
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