Momordica charantia (bitter melon): 111024857
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Entry
111024857 CDS
T05045
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111024857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcha03036
]
111024857
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
111024857
SWR1 complex
111024857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
111024857
NCBI-ProteinID:
XP_022158353
UniProt:
A0A6J1DVV1
LinkDB
All DBs
Position
Unknown
AA seq
2049 aa
AA seq
DB search
MASKGPRSKLDHETRAKRPKILEAPREPHRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KKVALRASKGMIDQATREERKLKEEEQRLRKLALNISKDVKKFWVKIEKLVLYKHQMELD
EKKKKALDKHLEFLLGQTERYSTMLAENLVETHKPLQTNSSHGLHNVHFQERDENRTVDE
PPEFNDEHESDFVDFDEEFDLRSEDESEDNEHTIDEDEALITEEERQEELEALHNEVDLP
LEELLKRYKGEKDGMEGSPETSTGGAEETAGEEGHGKENECSTSHKVDEIDSLGFAGRRC
NQINGESSSVQNHTEREICETENLSMLSMEFSKDNALYDFSEEHEDDDYDFAGGEEKDDE
TTLSEEEKLENVDSNNAMDEISMLQNESEIPIEELLARYEKDHDNDHDSDNEAENASDFS
DTLVDTPSHEDIEPKHLDVCVHENNDPSKSHSSASSPPERKGSLESSEERESEDRIFDAA
AAARSAQPTGNTFSTTKVRTKFPFLVKHSLREYQHIGLDWLVTMYEKRLNGILADEMGLG
KTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFK
RQGWMKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSK
RRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFSNPISGMVEGQEKVNKEVLDR
LHNVLRPFLLRRLKRDVEKQLPKKYEHVINCRLSRRQRHLYEDYIASSETQATLASGNFF
SMINVIMQLRKVCNHPDLFEGRPIISSFDMAGIVIQLSSSVCSALSPSRFSTVDLKGLGL
LFTHLDFSMTSWERDEVRAIATPSSLIKGCTDVNKTEESGAGFRYRKRFHGSSIFADIQN
AIMEERVRQAMERAEATAWWNSLRCDRKPIYSASLRDLVTVRHPVYDLYQHKANPSSYCY
SSKIADIVLSPVERFQMMMGLVESFTFAIPAARAPPPLCWYSRGHSDVLLHPSYEQNCSR
LMFPLLTPIRSAIIRRQVYFPDRRLIQFDCGKLQELSILLRKLKSEGHRALIFTQMTKML
DILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADT
VIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDNLVIQ
SGSYNTEFFQKLDPMELFSGHRSLAIKNMQKEKNHPTNGNEVSVSNADVEAALKFVEDEA
DYMALKKVEEEEAVDNQEFTEEVIGRMEDDEFMNDDDMKLDEGGDQAGDIVMSNKDNEAI
IHGASDPNEERAVIVATKEDDVDMLADVKQMAAAAAATGQTILSIDDQLRPIDRYAIRFL
ELWDPIHDKAAVESDVQFEETEWELDRLEKYKEEMEAEIDEDEEPLVYESWDADFATEAY
RQQVETLAQHQLMEDLEYEAKRKEEEEAENDPTRNATPSEPKPKSKKKSKKTKFKSLKKG
SLSSELKLVKKEASMEFMSTDDEDICSDDILESLSAQSSLQKKRKRAEFSLDSESGKSLK
KKSKKFRKNIGDISSLDLQPNASGVQCDEAIEVKPRENGVDLEHKLVGRSRMGGKISITS
MPVKRVLMIKPEKLKKGNIWSRDCVPSPDFWLPQEDAILCAMVHEYGTHWSLISSTLYSM
TAGGSYRGRYRHPVHCCERYRELIQRYVISAPDNPNNEKTTNASSGKALLKITEENIRVL
LDIAAEQPDGEHLLQKHFTALLSTVWKARSRGDCCLDTSLYRNGFYSGGRYFATGNHISR
YLGRETTGKLKFGNPGHNYKLLAAALSDAGCMRKDDKKSHPYHGERASVTTEQLELILEF
EGEDDHNMPFPSSINLSVSDSVYLPLMNMDTCESSDVRRRKGVAEGRLRDAARACNEDFH
GWASSVFPINDLKSRSVPKSQSFGKHKLAVTDSSKSSKSKFRKTGADHGESSHLIADPVV
HQMPSVIPEDVHNLYSLSSPIITDYSFPFGMNEYPSPVEEPESLGMVPDNYIPGLISGLD
ISPNFTDIG
NT seq
6150 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaaaggtcccaggtctaaacttgatcatgagacaagagccaagcgcccaaag
atacttgaagctccaagagaacctcatcgacctaaaacacattgggatcatgttttagaa
gagatggtttggctttcaaaggactttgagtctgagcggaaatggaagttagctcaggca
aaaaaggttgctttaagagctagcaaaggcatgatagatcaagctacaagggaagaaagg
aagttgaaggaagaagagcagcggttgagaaaacttgctctcaatatttcaaaggatgta
aagaagttctgggtgaaaatagaaaagctggtgctttacaagcatcagatggagctggat
gagaaaaagaaaaaggcactcgacaaacacctggagtttcttttagggcaaacagaaagg
tactcaacaatgctggcagaaaatcttgtggaaactcataaacctttgcagacgaattct
tcacatgggctacacaatgttcacttccaagaaagggatgaaaacagaactgttgatgaa
cccccagagtttaatgatgaacacgagtcagattttgtggactttgatgaagaatttgat
ttaagatcagaagatgaatcagaagataacgagcataccattgatgaagacgaggccctg
ataactgaagaagaaaggcaagaggaattggaggctttgcacaatgaagttgatcttcct
cttgaagagcttcttaaaagatataaaggagagaaagatggtatggaaggaagccctgaa
acaagtacaggaggagctgaagagacagcaggagaagaaggtcatggaaaagagaatgaa
tgttctacatcgcacaaggttgacgaaattgactcacttggtttcgccggtcgtcgttgt
aatcaaataaatggggaatcatccagtgtacaaaaccatacagaaagagagatctgtgaa
acagaaaatctatccatgctatctatggagttttccaaggacaatgcattatatgatttc
agtgaagaacatgaagatgatgactatgattttgctggtggagaagaaaaggatgatgaa
acaactttgtcagaggaggagaaactggaaaatgtggattcaaacaatgccatggatgag
atttcaatgctgcaaaatgagagtgaaatacctatagaagaactacttgcaaggtatgaa
aaggatcacgacaatgatcatgattcagataatgaagctgaaaatgcttctgatttttca
gacacccttgtggatactccatctcatgaagatattgagccaaaacatcttgatgtctgt
gtgcatgaaaataacgaccccagtaaatctcactcatctgcaagttcacctccagagagg
aaagggtccttagaaagttctgaagaaagggagagtgaggacagaattttcgatgctgca
gctgcagcaagatctgcacaaccaaccggcaacacattctccacgactaaagttcgtaca
aaattccctttccttgttaagcactctctacgtgaatatcaacatattggcttggattgg
cttgtgactatgtatgagaaaagactaaatgggattcttgctgatgaaatggggcttggg
aagacaatcatgaccattgctttgcttgctcaccttgcttgtgaaaagggaatatggggt
ccccatcttattgtggttccaacgagtgtcatgcttaattgggagactgagtttcttaaa
tggtgtcctgcttttaaaattcttacttactttggaagtgcaaaagagcgcaagtttaag
aggcaaggatggatgaaaccaaactcatttcatgtttgcataacaacttacaggttggtt
atccaggattctaaagttttcaaacggaagaagtggaaatatctaatactagatgaagct
catctaattaaaaattggaagtcacaaaggtggcagactctcttgaacttcaattctaaa
cgacggattttactaactggtaccccccttcaaaacgatctgatggaactctggtccttg
atgcactttttgatgccccacatttttcagtctcatcaggaatttaaggattggttcagc
aatccaatttctggaatggtagaggggcaggaaaaagtgaataaggaagttcttgatcgc
ttgcacaatgttctccgcccctttttacttcgtcggctgaaaagagatgtagagaagcag
ctcccgaagaaatatgagcatgtcataaactgtagattgtcaagaaggcagcgccatttg
tatgaagactatattgctagttcagaaacacaagctacccttgccagtggcaatttcttt
agtatgattaatgttattatgcaacttagaaaagtttgtaaccatcctgatttgttcgag
ggtcgtccaatcatcagttcttttgatatggcaggcattgtcatacagttgagttcttct
gtatgttctgcactatcacctagccggttttctacagtcgatcttaaggggttgggactt
ctattcactcatcttgactttagcatgacttcatgggagagggatgaagtgagagctatt
gctaccccatcgagtttaatcaaggggtgtactgatgtgaataaaactgaggaaagtgga
gctggatttagatatcggaagagattccatggatcgagtatttttgcagacattcaaaat
gccattatggaggaaagagtaaggcaggcaatggaacgagcagaagctacagcatggtgg
aattccttgagatgtgacagaaagccaatttattcggcatcccttagggatttagtgacg
gtaaggcatccggtttatgatttataccagcataaggcgaatccctcatcctattgttat
tcctcaaaaatagctgacattgtcctttcaccagtggaacgtttccagatgatgatgggc
ttagttgaaagtttcacgtttgcaataccagctgcacgggctccaccgcctctgtgctgg
tacagtagaggccattctgacgtgcttctgcatccatcttatgagcaaaattgctcccga
ctcatgtttccccttctaactccaataagatctgcaattattcggaggcaagtgtatttt
ccagacaggaggctgatacaatttgattgtggcaaattgcaggaactttctatcctgcta
aggaaactaaaatctgaaggtcaccgagcattaatattcacccaaatgacaaagatgctt
gatatcttggaggctttcatcaatctgtatggttatacttacatgcgtctggatggatcc
actcagcctgaggagagacagacgttaatgcagcgatttaataccaacccaaaaattttc
cttttcatattatcaactcgaagtgggggtgtaggtatcaatcttgttggtgcagatact
gttatcttttatgacagtgactggaaccctgctatggatcaacaagcacaagaccgctgt
catcgcataggacagacacgtgaagttcatatatatcgtctaattagtgagagcaccatt
gaagagaatatcttaaagaaggcaaatcagaagcgtgctcttgataatcttgttattcaa
agtggtagttacaacactgaattcttccagaagcttgatcctatggaattgttctcaggt
cataggtctcttgccataaaaaatatgcaaaaggaaaaaaatcaccccaccaatggaaat
gaggtttctgtatctaatgcggatgtggaggctgctttgaagtttgttgaagatgaagca
gattatatggctttgaagaaagttgaagaagaagaagctgtggataatcaggaatttact
gaagaggttattgggaggatggaagatgatgagtttatgaatgacgatgatatgaagctt
gatgaaggtggagatcaagctggtgacattgttatgtcaaacaaagacaatgaggcaata
atacatggagctagtgatcctaatgaagagagagctgtaattgtagctaccaaagaagat
gatgttgacatgctggcagatgtcaagcaaatggctgcagcagctgctgcaactggacaa
accatattgtccattgatgatcagctacggccaatagatcgatatgcaatacgttttctg
gaactgtgggatcctatacatgacaaagcagctgtggaatcagatgtccagtttgaggag
acagaatgggaactggaccgtcttgagaagtataaagaggagatggaagctgagattgat
gaagatgaagaacctcttgtatatgaaagttgggatgctgattttgcaactgaagcatat
agacagcaagttgagaccctggcacaacatcagttgatggaggatttggaatatgaggct
aagcggaaagaagaagaagaggctgaaaatgatcccacgaggaatgcaacacccagtgaa
ccaaaacctaagtctaaaaagaaatccaagaaaaccaagttcaaatctctgaagaagggt
tctctttcttctgagttgaagttggtgaaaaaagaagcatcgatggagttcatgtctaca
gatgatgaagatatatgtagtgatgatatccttgaatcattatcagctcagtcaagctta
cagaaaaaacgtaagagggctgaatttagtcttgatagcgagtcaggaaaatccctgaag
aaaaaatctaaaaagttcaggaaaaatattggggatatttcctcacttgatctacagccc
aatgcgtcaggtgtgcaatgtgatgaagctatagaagttaaaccacgcgagaatggtgtt
gatcttgaacataaattagttggccgtagtagaatgggagggaagatatctattacatcc
atgccagtgaagagagtattaatgataaaaccggagaagctaaaaaaggggaatatttgg
tcaagggattgtgttccttccccagacttttggttgccgcaggaggatgcaatattgtgc
gcaatggtacatgaatatggcacacattggagtttgatcagttcaaccctatacagtatg
actgctggtgggtcttatagagggagataccgccatcctgttcattgttgtgagaggtat
agggaactcatacaaaggtatgtcatatctgcaccagataatcctaataatgagaagacc
acaaatgctagctctggaaaagctcttctcaaaatcacagaggaaaacattcgagtactg
ttagacatagctgctgagcagcctgatggagagcacctacttcagaagcacttcactgcc
ctgctctcaaccgtgtggaaggctagatcacgtggcgactgttgtttagatacctcactt
tatcggaatggtttttattctggtggaaggtattttgcaactggtaaccacatttctcga
tatttgggaagggaaactacagggaagttgaaatttggtaacccaggacacaattataag
ttactagctgctgcacttagcgatgctggttgtatgaggaaagatgataaaaagtcccat
ccctatcatggggaacgtgcatcagtcactacagagcagttggagttaatactcgagttc
gagggggaggatgatcataacatgccatttccatcttccattaacttatcagtatctgat
tcagtttacttgcccttgatgaacatggatacatgtgaatcttccgatgttcggaggcgg
aagggagttgctgagggccgattgagggatgctgctagagcttgtaatgaagatttccat
ggatgggcttcttctgtattcccgataaatgatctcaagtctcgctctgtgccgaaatca
caatcgtttggaaagcataagctggcagtcactgactcttccaagtcttctaaatccaag
ttcagaaagactggagcagaccatggagagagttcccacctgattgctgacccagtggtg
catcagatgccatcggttatcccggaggatgtccataacttatattccctcagttcacca
attattacagactactcattcccatttggcatgaatgagtatccatcaccagtagaagaa
ccagaaagtctggggatggtccctgataactatatcccgggtttgatttcaggtctcgac
ataagccccaactttaccgatattggctag
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integrated database retrieval system
