Momordica charantia (bitter melon): 111025434
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Entry
111025434 CDS
T05045
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcha03009
]
111025434
03036 Chromosome and associated proteins [BR:
mcha03036
]
111025434
Enzymes [BR:
mcha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111025434
Ribosome biogenesis [BR:
mcha03009
]
Eukaryotic type
Pre-60S particles
Helicases
111025434
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
111025434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111025434
NCBI-ProteinID:
XP_022158991
UniProt:
A0A6J1E2K3
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MDKKKMKNKTLVEEAPVSETAFDQNSDELVHSDKKKKKKSKGDKESKKRKAVEVAEDEDR
SDTSSELGEPVNSRLKSSSKDKKSGKKVKLIESDEDAEDEKAEDHNAVSRFRISEPLRER
LKEKGILSLFPIQAMTFDTVFDGSDLVGRARTGQGKTLAFVLPILESLINGPSKSLTGYG
RSPSVLVLLPTRELADQVFEDFKFYGNALGLESCCLCGGMLYGPQETKLRRGVDIVVGTP
GRVKDHINRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSATLP
DWVKDIASRFLKANKKTADLVGNEKMKASKDVRHIVIPCSDSERSRLIPDIIRCYSSGGR
TIIFTETKESASELAGLLPGARALHGDIQQSQRTVTLSGFRSGKFLVLVATNVAARGLDI
NDVQLIIQCEAPKDIEAYIHRSGRTGRAGNTGVAVTLYDPRKSGRISRIERESGVKFEHL
SAPQPIDIARSAGASAAESVTQVSDSVIPPFKSAADEMVNSSSLTAVELLAKALAKLSGY
TEIKSRSLLTSMENHVTLILEAGKPIYSPSFAYSVLRRFLPEEKVESVKGMALTADGYSA
VFDVRTEDLDAFLAGKENAANVNLEVLKTLPKLQDREQSRGGGRFGGGGRGGFGDRRNGG
GRFSGGRGGGRGGFSDRRNRFSGNSGGKGRSFGGGSSW
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagaagatgaagaacaaaactcttgtggaagaagccccagtttccgagact
gcctttgaccaaaacagcgacgagttggttcattcggacaagaagaagaagaagaagagt
aagggtgataaggagagcaagaagcgaaaagccgtggaggtggctgaagacgaggatagg
agcgacacgagctcggagttgggcgagccggtgaattcgcggttgaaaagcagcagcaag
gacaagaagagcggcaagaaggtgaagttgatcgagtctgacgaagatgctgaggatgag
aaggctgaggaccataatgctgtttctaggtttcggatatcggaaccgctgagggagagg
ctgaaggagaagggtatcctctctttgtttccgattcaggccatgacgtttgacaccgta
tttgacggttctgatttggttggacgagccagaacaggacagggtaaaacactggctttt
gtcttgcccatcttggagtctttaataaacgggccttctaaatcgttgactggatatgga
aggtctcctagtgttctagtacttttacccactagggaattggctgaccaggtgttcgag
gacttcaaattttatggtaatgcattaggattggaatcttgctgtttatgtggaggaatg
ctttatgggccccaagaaactaaattaagaaggggggttgacatagttgttggaacacct
ggtcgtgtaaaggatcacattaacagaaacaatattgatttgcggtcgttaaagtttcgg
gtccttgatgaagctgatgaaatgttgaggatgggttttgttgatgatgttgaatttatt
ctcggcaaggtggaggatgtaaacaaagttcaaacacttctgttcagtgccactttacca
gactgggtgaaagatattgcttccaggttccttaaagcaaataagaaaactgcagatctt
gttggtaatgagaaaatgaaggcaagtaaggatgttaggcatattgttattccttgttct
gattcagaaaggtctcgacttattcctgatatcatacgatgctatagcagcggaggtcga
actattatatttacggagacaaaggaatctgcatcagagcttgctggtcttcttccagga
gcacgagccttacatggagatatacagcagtctcagcggacggttacactttctgggttc
agatcaggcaagtttctggtattagtggccaccaatgtggcagcacgtggattggatatc
aatgatgttcagttaattattcagtgtgaggcgccaaaggacatagaagcttatattcat
cggtctggaagaacaggaagagctggcaatactggagttgctgtgacattgtatgatcca
aggaagtcgggaagaatttccagaatagaaagagaatctggtgttaagtttgagcacttg
tctgctcctcaaccaattgatatagctcgatctgctggagcaagtgccgcagaatcagta
actcaagtctctgacagtgtaattccaccgttcaaatctgccgctgatgaaatggtgaat
agctctagtttaactgctgtggagctacttgccaaggcccttgccaagctctctggttat
acggagataaagagtagatcacttctgacgtcaatggaaaatcatgtcactttaattctc
gaggctggaaagcctatctattccccatcatttgcctacagtgtcttgaggagattcttg
ccagaggagaaggtagaatcagtcaagggtatggcattgaccgctgatggatacagtgct
gtatttgatgttcgaacagaagatttggatgcatttcttgctggtaaggaaaatgcagcg
aatgtgaatttagaggtgttgaaaacgctgccaaaattgcaagatagggagcaatcaaga
gggggtggaagatttggaggtggtggtcgcggtggattcggtgatcgcagaaatggtggt
ggtaggttttcaggaggaagaggaggtggccggggaggattttctgatagaagaaacagg
ttttcgggtaattcgggtggaaaaggtcgaagctttggtggcggaagcagttggtaa
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