Momordica charantia (bitter melon): 111025673
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Entry
111025673 CDS
T05045
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111025673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcha03021
]
111025673
Transcription machinery [BR:
mcha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
111025673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Motif
Other DBs
NCBI-GeneID:
111025673
NCBI-ProteinID:
XP_022159266
UniProt:
A0A6J1E3E1
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN
VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL
EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRG
EEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETT
APDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE
DDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGKRKL
NGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIR
AVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcgatctgctgctgaagccgtcgtgcagtggatgcgggtcctcgacggatttg
tatgggagcaattgtaagcacatgactttgtgcttgacctgcggcaaaactatggctgag
aataagggcaaatgttacgactgtggcgctactgtaactcgcttaataagagaatacaat
gttcgagcaagtgcaagtagcgacaagaactacttcattggtaggttcatgagtgggctg
ccaaacttctcgaggaagagaaatgctgaaaataaatggtctctttacaaggaaggtctt
caaggacgccagctttctgatgccttgcgggagaaatacaagaatagaccctggctcttg
gaagatgaaacgggccaatttcagttccaaggacatcttgaaggttcacagtcagcaaca
tattacttgcttgtattgcaagggaaggaatttactgccattcctgctggttcttggtac
aatttcaacaaagtggcacagtataagcaacttacgttggaggaggcagaagagaaaatg
aagaatcgaaagaaaacagctgatggatatgaaagatggatgatgaaagctgcaagtaat
ggtcctgctgcttttggtgaagtcgagaagtttgatgacaaagatgctgttggtgctagt
ggtcgggggcgcaggaaaactactggtgatgagaatgaaggtaatgcctcagatagggga
gaagaagatgaagaagaagaggcggcaaggaagaacaggttgggcctcaataaaaagagc
ggcgatgatgatgatgaggaaggtcctaggggaggtgaccatgacatggacgatgatgat
attgagaaaggagatgattgggagcacgaagaaatttttactgatgatgacgaaactact
gctcctgatcgtgaagaaagggaggatttggcccccgaggttccggcacctccagaaatc
aagcaggatgaagacgacgaggatgaagaaaatgaaggggagggtggtctgagcaaatct
ggaaaagagttgaagaaattgcttaggcgtactggaggtcttaatgattcagatggagag
gatgacgacgacgatgacgatgtggaggaggatattggtggcaccccagttgtggcttcg
aagcagaaggatacagttaaagaagaagctgcagccagcagtccctcaaagcctatacct
tctggatcttctaagggaaccccgtcttctacgaaggcatccaaggggaaaagaaaatta
aatggcgacgatgtgaaaccatctaatgtacctccgaagaaagtgaaaaccgagacggay
tcgaagtctacagacgagggtgtgtctacatctaaaagtacggcctcgaaaggtgcaccg
gcatcagtcaaaacagaatcggcattgccttctggacctgttactgaagaagaaatcagg
gctgttttgcggcaaaggactcctgtgactacacaggatcttgttgcaaaattcaaagca
agactaaggtctcaagaggacaagaatgcatttgcagaaatactgaggagaatttcaagg
atccaaaagactaatggaggaccaagttatgttgtgttgagaaaacctgaagactag
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