Momordica charantia (bitter melon): 111026016
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Entry
111026016 CDS
T05045
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111026016
Enzymes [BR:
mcha01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
111026016
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
111026016
Prokaryotic type
111026016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
111026016
NCBI-ProteinID:
XP_022159672
UniProt:
A0A6J1E0G3
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MIAGSELPRCGSTSLCRASAPSSRSNYRRLKLLFQFPSLSLIRTKMASTPSNSVQSGRIR
VLKDGTGCLDRPVGPVVYWMFRDQRVKDNWALIHAVDEANKANVPVAVAFNLFDRFLGAK
SRQLGFMLRGLQKLQHDLEETLQIPFFLFQGEAEQTIPNFMRECRASLLVTDFSPLREVR
KCKEEICKRVDDSVKVHEVDAHNVVPIWAASEKLEYSAKTLRGKINKKLPEYLIDFPVLL
IPTRKWPSTDKFIDWNILITDVLRKGADVPEIEWCEPGEKAAMEVLMGSKDGFLTKRLKS
YAVDRNNPLKPRGLSGLSPYLHFGQISAQRCAIEARNVQKLNPQAVDVFLEELIVRRELA
DNYCYYQPRYDSLLGAWEWARKTLMDHASDKREYVYTREQLEKAQTSDPLWNASQLEMVF
HGKMHGFMRMYWAKKILEWTKGPEEALEICIYLNDKYEIDGRDPNGYVGCMWSICGVHDQ
GWKERPIFGKIRYMNFAGCKRKFDVDGYIAYVKRLVGGIKKRKPEEALQDRKPKEIRC
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccggttcggaacttccgcgctgtggctcaacttctctctgccgcgcctccgcc
ccatcttcccgttcaaactaccggcgactgaaactgctcttccagttcccttccctgtcc
ttaatccggacaaaaatggcctctaccccctcgaattctgtccagtcgggtcggattagg
gttttgaaagatggaaccggatgtcttgaccgacccgtgggtccagtggtgtactggatg
ttcagggatcaacgggtgaaggacaattgggcgttgattcacgccgttgatgaggccaac
aaagccaatgttcctgttgctgtagcgttcaatttgttcgatcgatttttgggggcaaag
tctcggcaattagggtttatgctgaggggtctgcaaaaactgcaacatgatcttgaagaa
acgcttcaaataccattcttcttgttccagggggaagctgaacagactataccaaatttc
atgagagaatgtagggcttcacttttagttactgacttctcacccttacgagaagttcgg
aagtgtaaagaggaaatttgtaagagggtagatgattcagttaaagtacatgaagttgat
gcccacaatgtggtacccatttgggctgcatccgagaaattggagtacagtgcaaaaact
ttaaggggcaagataaataaaaagctcccggaataccttatcgatttccctgttctgctc
attccaactagaaaatggccttccactgataagtttattgattggaatatccttatcact
gatgtcttgaggaaaggagcagatgttcctgaaattgaatggtgtgaacccggggaaaag
gctgccatggaagtattgatgggtagtaaagatgggtttttgactaagaggttgaagagc
tatgcagtagataggaacaatccattaaaacctaggggcctctccggtctctctccatat
ttgcattttggccaaatatctgcacaacgttgtgccatagaagcacgtaatgtacaaaaa
ctcaatccacaggcagttgatgtgtttcttgaggagttaattgttagaagggaacttgct
gacaattactgctactatcaaccgcgttacgattctctgcttggggcttgggaatgggca
cgcaaaaccttgatggaccatgcatccgataagcgagaatatgtttacacgagggagcaa
ttggagaaggcgcagacatcagatccactctggaatgcttctcaattggagatggttttc
catggaaagatgcatggttttatgaggatgtactgggccaaaaaaattttggagtggaca
aaaggacctgaggaagccctggaaatttgcatatacttgaatgacaagtatgaaattgat
gggagggatccaaacggatatgttggttgcatgtggtcaatctgtggcgttcacgaccag
ggttggaaagaacgaccgatattcgggaagatacgatacatgaactttgctgggtgcaag
agaaaattcgatgttgatggctacattgcctacgtcaagaggcttgtgggtggaatcaag
aaaagaaaaccagaggaggccctgcaggatagaaagccaaaggaaattcgttgctag
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