Mesoplasma chauliocola: CK556_00035
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Entry
CK556_00035 CDS
T05062
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mchc
Mesoplasma chauliocola
Brite
KEGG Orthology (KO) [BR:
mchc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mchc03032
]
CK556_00035 (gyrB)
03400 DNA repair and recombination proteins [BR:
mchc03400
]
CK556_00035 (gyrB)
Enzymes [BR:
mchc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CK556_00035 (gyrB)
DNA replication proteins [BR:
mchc03032
]
Prokaryotic type
DNA Topoisomerases
CK556_00035 (gyrB)
DNA repair and recombination proteins [BR:
mchc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CK556_00035 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
SMC_hinge
HATPase_c_3
DUF7625
Motif
Other DBs
NCBI-ProteinID:
ASZ08760
UniProt:
A0A249SMB3
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All DBs
Position
6266..8173
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AA seq
635 aa
AA seq
DB search
MAEQNYGAESIKVLKGLEAVRKRPGMYIGSTSKAGLHHLVWEIMDNSVDEAMAGFANKII
LTITKEGEIIVQDNGRGIPVGIQTDSGKSALELVFTQLHAGGKFDSDSYKISGGLHGVGA
SVVNALSLYVDVEVKREGKIHHQLFSGGGTQQSEIKIIGETSETGTTVRFKPDPEIFLEG
TEFDYETIRNKVKQLSYLNKGLVIELNDLRIDKHVEYHFPNGILDYVKEKNETKAKINPS
IFYVDDKHEDIEVEVALQYNAEYQENLITFVNNINTHEGGTHEDGLRQSLVRVINRYAEK
VATGNKPAAKYSWDDIKEGMVCIVSIRHTDPQYEGQTKTKLANPDAKRAVDAVVGDAFEE
FLLKSPEDAKAILDKNANAQKARIAAQRAREETRRKSALDTFSLPGKLADCESKDPEIAE
LYLVEGDSAGGSAKTGRNRRFQAILPLRGKVLNVERVAEVRAFANNEIKSIVTAIGTGIK
EDIDLSKLRYGKIVIMTDADVDGAHIRTLLLTFFYRYMKQLVVDGHVYIAQPPLYKIEAG
KKVAYAYSDAELEELKAGDFKDTRFTIQRYKGLGEMDPIQLWETTMDPERRTMLQIKLED
AAIANEVFSDLMGEDPELRRNYIQENAEFVENIDF
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaaaattatggtgctgaatcgattaaagttcttaagggtttagaggctgtt
agaaaacgtccaggtatgtatattggatctacatctaaagctggattacaccacttagtt
tgagaaattatggataactctgttgatgaagcaatggcagggtttgcaaacaaaattatt
ttaactatcactaaagaaggagaaatcatcgttcaagataatgggcgtggtattcctgta
ggaattcaaactgactcaggtaaatcagctttagaattagtttttactcagttacatgct
ggtggaaaatttgactcggattcatataaaatctcaggaggactacatggggttggagct
tcagtagttaatgccttgtcattatatgttgatgttgaggttaagcgtgaaggaaaaatc
caccatcagttatttagtggtggaggtactcaacaaagcgaaattaaaatcattggtgaa
acaagcgaaaccggaacaacagttagatttaaaccagatcccgaaatctttttagaggga
actgaatttgactatgaaacaattagaaataaagtaaaacaactttcatacttaaacaaa
ggcttagttattgaattaaacgatttaagaattgataagcatgttgaataccactttcca
aatggtattttagattacgttaaagaaaaaaacgaaacaaaagcaaaaattaacccaagc
attttctacgttgatgataaacatgaagatatagaagttgaagtggctttacaatataac
gcagaatatcaagaaaatttaattacatttgttaacaatattaatactcacgaaggtggt
actcatgaagatggattaagacaatctttagtaagagttattaaccgttatgcagaaaaa
gttgcaactggtaataagccagctgctaaatattcttgagatgatattaaagaaggtatg
gtatgtatagtttcaattagacatactgatccacaatatgaaggacaaactaaaacaaaa
ttagccaacccagatgctaaaagagcggttgatgctgttgttggtgatgcttttgaagag
ttcttattaaaatctccagaagatgcaaaagcaattttggataaaaatgcaaatgcacaa
aaagcgagaattgctgcgcaaagagcaagagaagaaactagaagaaaatcagctttagat
acattttctttacctggtaaattagcagactgtgaaagtaaagatccagaaattgctgaa
ttatatttagtcgagggggattcagctggaggttctgctaaaacaggccgtaaccgtaga
ttccaagcaattttacctttaagaggaaaagttttaaatgtagaacgtgttgctgaagtt
agagcgtttgctaataatgaaattaaatcaattgttacagctattggtactggtattaaa
gaagatattgatttatcaaaattaagatatggaaaaattgttattatgactgatgctgat
gtcgatggtgctcacattcgtacattattattaaccttcttctatagatacatgaaacaa
ttggttgttgatggacatgtttatattgcacaaccaccactttataaaattgaagcaggt
aaaaaagttgcttatgcttatagtgatgctgaacttgaagaactaaaagcaggtgacttt
aaagacacaagatttacgattcaacgttacaaaggacttggagaaatggatccaattcag
ttatgagaaacaacaatggatccagaaagacgtacaatgttacaaattaaattagaagat
gctgcaattgctaatgaagtattctctgacctaatgggagaagaccctgaattaagaaga
aactatattcaagaaaatgcagagtttgtagaaaacatagatttctag
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