Mesoplasma chauliocola: CK556_03255
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Entry
CK556_03255 CDS
T05062
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mchc
Mesoplasma chauliocola
Pathway
mchc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mchc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CK556_03255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mchc03400
]
CK556_03255
Enzymes [BR:
mchc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CK556_03255
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CK556_03255
DNA repair and recombination proteins [BR:
mchc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CK556_03255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ASZ09347
UniProt:
A0A249SNZ8
LinkDB
All DBs
Position
complement(716565..717392)
Genome browser
AA seq
275 aa
AA seq
DB search
MPELPEVRTVANFLDKKVSNLNIVKGECFFSKMIWRNSLNEFMQSIINQKIIKVFNYGKY
LLFQLPNKMIISHLRMEGKWSVTSKEIHIYNKNHLRFQFKLSDGNYLKYYDSRKFGTLEV
WDNEDYIKMSGMYKLGPEPLNNQPNLKYLKEKANKSSMPIKGFILDQTVLCGIGNIYANE
ILFASKINPERATKTLSDEELSSVIKYSNKILEKSIKLKGTSIHSYKSGNGETGQFQHEL
KVHLRKDEPCFKCGTLIAKKQVAGRGTFYCPECQR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagtacgaactgttgcaaactttttagataaaaaagtttctaat
ttaaatatagttaaaggcgaatgtttcttttcaaaaatgatttggagaaactcgctcaat
gaatttatgcaaagtataataaatcaaaaaataattaaagtatttaattatggtaaatat
ttactttttcaacttccaaacaagatgataataagtcacctaagaatggaaggaaaatga
agtgtaacttctaaagaaattcatatttataataagaatcatttaagatttcaatttaaa
ttatctgatggaaattatttaaaatattatgattcaagaaaatttggaactttagaagtt
tgggataacgaagattacataaaaatgagtggtatgtataaacttggccctgagccatta
aataatcaaccaaatttaaaatatcttaaagaaaaggcaaataagtcaagtatgcctata
aaaggatttatattagatcaaactgttttatgtggaattggaaatatctatgcaaatgaa
attttatttgcatctaagataaatccagaaagagctacaaaaacactatcagatgaagaa
ctaagctcagttataaaatactctaataaaatactagaaaaatcaattaagctaaaaggc
acttcaattcatagttataaatctggtaatggagaaacaggacaatttcaacatgaacta
aaagtacatttaagaaaagatgaaccatgttttaaatgtggtacattaattgcgaaaaaa
caagttgcaggtaggggtactttttattgccctgaatgtcaaagataa
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