Mycobacteroides chelonae: BB28_06890
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Entry
BB28_06890 CDS
T04665
Name
(GenBank) nuclease
Organism
mche
Mycobacteroides chelonae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
RNase_H_2
AAA_11
AAA_30
AAA_19
UvrD_C_2
Viral_helicase1
AAA_22
AAA_16
NPHP3_N
PDDEXK_1
AAA
ResIII
nSTAND3
Helicase_RecD
DEAD
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ANA97523
LinkDB
All DBs
Position
complement(1354478..1357903)
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AA seq
1141 aa
AA seq
DB search
MFVLDGRVVYSASDLASAARCEYALLRVFDAKLGWGPTPPRDDELLARTATLGDAHEAHH
LAELQKRFGSGVASIPFPPTFTLDGLNAAAAATKRAFDDGHPVVYQAAMFDGRFLGFADF
VVRESQTYRVCDTKLARSAKVTALLQLAAYADSLMATDVPVSPEVRLILGDRSTVDYPVA
DLVGVYRQRRIQLQDLLDRHLAGGAAVQWSDAHVRACFRCPACEPEVDRTDDLLLVAGMR
ISQRAALLEAGVGTVAELSARVEPVPDLSARSLQQLVAQSQLQVRQRESGTPQFEVADPI
PLGTMPAPNPGDIFFDFEGDPLWTADGVQWGLEYLFGVLEYDRSGNEKFRPIWAHDRHSE
RKALTTFLDLVAKRRRRYPGMHVYHYAAYEKTALLRLAGRYGVGEEQIDDLLRDNVLVDL
YPVVRKSIRSGSSGYGLKALEPLFIESGKRSGDVTTAVDSINEYARYCALRDSGDPAAQE
VLDSIAEYNRYDCASTRKLRDWLLVRAFEHGITHLSSPAAIGEKDEPQPDEVGGALAAFV
GDADPTDRRADQTAAAMLSAARGYHTRERKPFWWSHFDRLNNPVDEWADTAGVFIVEGAE
LIEDWHKSGSQRKLRRHVRLTGDLAGGVLDDSVYALYEPPAPAGLGDGDPDRRASGSATV
VEITESGGVPVDVTIQELTPKNGEVFAEMPMALAPGAPVMTKALESAIEHVAADVAHGLP
DMPSTASIDILLRRNPRGAPLPPVGNGGYAEAIASALRNLDSSYLAVHGPPGTGKTFTAA
RVIAELVTREAWLVGVVAQSHAVVEHLLDQIVAAGVPPERVAKKASPYSGDAAWTQIRDS
DYAGFIASHAGEGAVIGGTAWDFANTTRVADGVLRLLVIDEAGQFSLANTLAVARGAQNL
LLLGDPQQLPQVSQGVHPEPVDCSALGWLVEGHGALPAERGYFLERSYRMHPALCQQVSQ
LSYDGELESAAPTRSLAGQLPGVRTRLVDHHGNATSSPQEAEAIASEITGLIGSEWTDES
GTRPLAQSDVLVVAPYNAQVLTVRAALAAAGLDEVLVGTVDKFQGRQAPVVFVSMTASAV
DDVPRGMSFLLNRNRLNVAISRAKFQAVIVRSPALTEYLPATPDGLVELGAFLALSPDLA
Q
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgtcctcgacggccgggtcgtctacagcgcttcggatcttgcctccgccgcccgc
tgtgaatacgccctgctgcgggtgttcgatgccaaactcggatggggccctacgccccca
cgtgacgatgaactactggcgcgcaccgcgactttgggcgacgctcacgaagcccaccac
cttgccgaattgcagaaacgcttcggctccggggtggccagcattccctttcctcccaca
ttcacactcgacgggctgaatgctgcggcggctgcgaccaaacgggccttcgacgacggg
cacccggtggtgtaccaggccgccatgttcgacggccggttcctcgggttcgcggacttc
gtggttcgggagagtcagacataccgtgtctgcgataccaaacttgcccgcagcgccaag
gtgacggcattgctgcagttggcggcctacgccgacagcctgatggcgacggatgtgccg
gtgtcgccggaggtacggttgattttgggtgatcgttcgaccgtcgactatccagtcgcc
gatctggttggcgtgtatcgccaacgacgaatccagttgcaggacttgcttgatcgccat
ttggcgggaggcgctgcggtgcagtggtcagatgcgcacgtgcgcgcctgcttccgttgt
cccgcgtgcgagccggaagtcgatcgcaccgacgacttgttacttgtcgcgggcatgcgg
atcagtcagcgtgccgcactgttggaggccggagtcggcaccgtcgcagaactgtccgca
cgtgtcgagccggtacccgatctgtcggcgcgcagtctgcaacagttggtggcacagtct
cagttgcaggtgcgccaacgcgagagtggtacaccacaattcgaggtggccgacccgatt
ccgctgggtacgatgccggcacccaaccctggcgacatctttttcgacttcgagggcgat
ccactctggacggcagacggcgtgcaatgggggctggaatacctctttggcgtgcttgag
tacgaccgatccggaaatgagaagttccggcctatttgggcccacgatcgccacagcgag
cgcaaagccctgaccaccttcctggacctggtagccaaacgtcgccgccgatatccaggc
atgcacgtctaccactacgcggcgtatgagaagaccgcgctgctgcgccttgcggggcgg
tacggcgtcggcgaggagcagatcgacgatctcctgcgcgacaacgtgttggtcgacctc
tatcccgtggtgcgcaaaagcattcgctccggatccagcggttatgggctcaaggcgctg
gagccgctgttcatcgaatccggaaaacgctccggtgatgtcaccaccgcagtcgactcg
atcaacgaatacgcacgctactgcgcgctgcgcgacagcggcgaccccgcggcgcaagag
gtgttggattccatcgccgagtacaaccggtatgactgcgcctccacgcgcaagctccga
gactggctactggtacgagcattcgagcacggcattacccacttgtcgtctcctgccgct
atcggcgaaaaggatgagccgcagcccgatgaggtcggcggggcgttggccgcgttcgtc
ggcgatgccgaccccaccgaccggcgcgccgatcaaacggcggcggccatgctttcggcg
gcgcgcggatatcacacccgtgagcgaaaaccattctggtggagccacttcgataggttg
aacaaccccgtcgacgaatgggccgacacggcgggagtcttcatcgtcgagggcgcggag
ctgatcgaggactggcataaatcaggtagccagcgcaagctccggcgacacgtgaggctg
acgggcgacctcgctggcggcgtcctcgacgacagcgtctacgcgctttacgagccgccc
gctcccgcggggctcggcgacggggaccccgaccgccgggcatctggttcggccaccgta
gtggagatcaccgaatccggcggcgtacccgtggatgtgacgatccaggagctcacgccg
aagaacggcgaggtattcgcggagatgccgatggccctcgcacccggcgcaccggtgatg
accaaggcactggagtccgccatcgagcacgtcgctgcggatgttgcccatggccttccc
gatatgcccagcaccgcatccatcgatattttgttgcgccgcaaccctcgtggtgcccca
ttgccacctgtcggcaacggcggatacgccgaagccatcgcttccgcgttgcggaatctg
gactcgtcctaccttgccgtgcacggcccaccgggaaccggtaagaccttcacggcggcg
cgcgtcatcgccgaactagtgacgcgggaagcgtggcttgtcggtgtggtggcccaatcc
cacgccgttgtagagcacctcctcgatcagatagtcgcggcgggtgtgcccccggaacgg
gtggccaagaaggcctcgccctacagcggcgatgccgcgtggacccagattcgggacagc
gactatgcggggttcatcgcatcccacgccggtgagggcgccgtcatcggtggcaccgca
tgggatttcgcgaacaccacccgcgtggccgatggcgtgctgcggctgctggtcattgac
gaggcgggccagttcagtttggcgaacacgctggcagtcgcacggggagcacagaacctg
ctgctgctcggtgatccgcagcagctgccgcaggtgtcgcagggtgtgcaccccgagccg
gtggactgctccgcgctgggctggctggtcgagggccatggcgcgctacccgccgagcgg
gggtacttcttggagcgctcgtaccggatgcatccagcactctgccaacaggtttcacag
ctttcgtacgatggtgagctcgagtccgccgccccgacacgcagtttggccgggcagctg
cccggggtgcggacgcggctggtggatcatcacggaaacgcgaccagcagcccgcaggaa
gccgaggcgatcgcttcggagatcactgggctcatcggttcggagtggaccgatgaatcc
gggacccggccattggcgcagtccgatgtgctggtggtggctccgtacaacgcgcaggtg
ttgacggtgcgagccgcgctggccgctgccggattggacgaggtgttggtggggaccgtg
gacaagttccagggccgccaagcaccggtggttttcgtatcgatgacggcctcggccgta
gatgacgtaccgcgtgggatgtcgttcctgctgaacagaaaccgcttgaacgtggcgatc
agccgcgcgaagttccaggcggtgatcgtccgatcgccggcattgaccgagtatctgccg
gccacacccgacggactggtggagctgggggcgttcttggcgctaagtccggacctggcg
cagtag
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